RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 ADAM15Q13444 863 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CUL3Q13618 768 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 TEDDM1Q5T9Z0 273 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 NKAPQ8N5F7 415 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ARL15Q9NXU5 204 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 NCKIPSDQ9NZQ3 722 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ITM2BQ9Y287 266 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ANKRD6Q9Y2G4 727 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 A8MUI8 341 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 MEI4A8MW99 385 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 NIPSNAP2O75323 286 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 AHSGP02765 367 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CTSEP14091 401 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 HTR1BP28222 390 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 MPP2Q14168 576 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 PTPRRQ15256 657 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 TBC1D25Q3MII6 688 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 LYPLAL1Q5VWZ2 237 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 PHYKPLQ8IUZ5 450 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 PPWD1Q96BP3 646 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 NXNL1Q96CM4 212 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 TLCD1Q96CP7 247 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 MED8Q96G25 268 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 SERAC1Q96JX3 654 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 TUBGCP5Q96RT8 1024 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 RPP25Q9BUL9 199 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 MRPL46Q9H2W6 279 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 FAM159BA6NKW6 160 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 RAD51BO15315 384 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CACNG3O60359 315 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 TSPAN8P19075 237 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 RPL26P61254 145 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ART3Q13508 389 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 SPDYAQ5MJ70 313 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ZDHHC20Q5W0Z9 365 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CAPRIN2Q6IMN6 1127 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ERN2Q76MJ5 926 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 MCOLN3Q8TDD5 553 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ACMSDQ8TDX5 336 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CCDC126Q96EE4 140 aa11.66□□□□□ -0.54
C2orf88-201ENST00000340623 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 INTS6Q9UL03 887 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 RPL26L1Q9UNX3 145 aaKnown RBP11.66□□□□□ -0.54
C2orf88-201ENST00000340623 CNTRLQ7Z7A1 2325 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 CFAP73A6NFT4 308 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 E9PBE3 544 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 MID1O15344 667 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 KLHL41O60662 606 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 PAK4O96013 591 aaPredicted RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 FTH1P02794 183 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ETV3P41162 512 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 HNRNPA1L2Q32P51 320 aaKnown RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 RBM20Q5T481 1227 aaKnown RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 LAYNQ6UX15 382 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 KYAT3Q6YP21 454 aaKnown RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 Q6ZNB5 142 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 SNX20Q7Z614 316 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 TRIM74Q86UV6 250 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 TRIM73Q86UV7 250 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 CPNE9Q8IYJ1 553 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 STAG3L4Q8TBR4 150 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 NUS1Q96E22 293 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 C8orf33Q9H7E9 229 aaPredicted RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 LHX3Q9UBR4 397 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 CIDEBQ9UHD4 219 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ZBTB14O43829 449 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 FOXN2P32314 431 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 FBXO48Q5FWF7 155 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 FITM2Q8N6M3 262 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 RNF148Q8N7C7 305 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 TMEM109Q9BVC6 243 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 WWP1Q9H0M0 922 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 OR2AG1Q9H205 316 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ZNF358Q9NW07 568 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 LNPEPQ9UIQ6 1025 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ZNF180Q9UJW8 692 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ACTL7BQ9Y614 415 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 AURKAO14965 403 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 KATNA1O75449 491 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 CATP04040 527 aaKnown RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 OGNP20774 298 aaKnown RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 CYP2A7P20853 494 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 PGGT1BP53609 377 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ITIH4Q14624 930 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 RGS9BPQ6ZS82 235 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 PTGR2Q8N8N7 351 aaPredicted RBP11.65□□□□□ -0.54
C2orf88-201ENST00000340623 TCF12Q99081 682 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 ACOX2Q99424 681 aa11.65□□□□□ -0.54
C2orf88-201ENST00000340623 TCRBV21S2A2A0A5A6 115 aa11.64□□□□□ -0.55
C2orf88-201ENST00000340623 OLFM2O95897 454 aa11.64□□□□□ -0.55
C2orf88-201ENST00000340623 PTGER3P43115 390 aa11.64□□□□□ -0.55
C2orf88-201ENST00000340623 RANBP1P43487 201 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms