RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TAAR2Q9P1P5 351 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 PYCARDQ9ULZ3 195 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 SNX12Q9UMY4 172 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 WASF3Q9UPY6 502 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 MSRB2Q9Y3D2 182 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 LY6G6EA0A0G2JKS1 128 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 EME2A4GXA9 379 aaPredicted RBP18.99■□□□□ 0.63
SYNE4-202ENST00000340477 USP27XA6NNY8 438 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 NUAK1O60285 661 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 DNAJC6O75061 913 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 PRAMEF1O95521 474 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 APRTP07741 180 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 ETS1P14921 441 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 JUPP14923 745 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 TCP1P17987 556 aaKnown RBP18.99■□□□□ 0.63
SYNE4-202ENST00000340477 BASP1P80723 227 aaKnown RBP18.99■□□□□ 0.63
SYNE4-202ENST00000340477 CHRNA6Q15825 494 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 HES3Q5TGS1 186 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 DENND5AQ6IQ26 1287 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 CHST15Q7LFX5 561 aaPredicted RBP18.99■□□□□ 0.63
SYNE4-202ENST00000340477 PRELID2Q8N945 189 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 CCL4L1Q8NHW4 92 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 WDR48Q8TAF3 677 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 ZDHHC1Q8WTX9 485 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 PTCD2Q8WV60 388 aaKnown RBP18.99■□□□□ 0.63
SYNE4-202ENST00000340477 MAGOHBQ96A72 148 aaKnown RBP18.99■□□□□ 0.63
SYNE4-202ENST00000340477 ARFGAP3Q9NP61 516 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 ATXN10Q9UBB4 475 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 U3KQA8 63 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 MYLKQ15746 1914 aa18.99■□□□□ 0.63
SYNE4-202ENST00000340477 CEP295Q9C0D2 2601 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 AP3B1O00203 1094 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 ZW10O43264 779 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 CDK14O94921 469 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 FUCA1P04066 466 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 SLC2A4P14672 509 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 ITGALP20701 1170 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 AK4P27144 223 aaPredicted RBP18.98■□□□□ 0.63
SYNE4-202ENST00000340477 AKT1P31749 480 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 KCNJ1P48048 391 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 POU6F1Q14863 301 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 C14orf28Q4W4Y0 310 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 LRRTM4Q86VH4 590 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 ACTRT1Q8TDG2 376 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 GRK7Q8WTQ7 553 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 ULK4Q96C45 1275 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 MS4A14Q96JA4 679 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 AP1M1Q9BXS5 423 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 SYNDIG1Q9H7V2 258 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 FKBPLQ9UIM3 349 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 SLC30A1Q9Y6M5 507 aa18.98■□□□□ 0.63
SYNE4-202ENST00000340477 KMOO15229 486 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 OPA1O60313 960 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 SUN1O94901 812 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ACP5P13686 325 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ZNF8P17098 575 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 TPH1P17752 444 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 VCLP18206 1134 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 RPL22P35268 128 aaKnown RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ZNF140P52738 457 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 TMPRSS15P98073 1019 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 INSCQ1MX18 579 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 OGFOD3Q6PK18 319 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 CRTC3Q6UUV7 619 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ADGRG6Q86SQ4 1221 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 NRROSQ86YC3 692 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 TRAPPC5Q8IUR0 188 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 GPR156Q8NFN8 814 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 OR52K1Q8NGK4 314 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ZNF398Q8TD17 642 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 COG1Q8WTW3 980 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 CCDC74AQ96AQ1 378 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 DEPDC7Q96QD5 511 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 NAPGQ99747 312 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 CCDC3Q9BQI4 270 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 STN1Q9H668 368 aaKnown RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ASB8Q9H765 288 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 EIF2B3Q9NR50 452 aaKnown RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 SMOXQ9NWM0 555 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 CRLS1Q9UJA2 301 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 CLCA2Q9UQC9 943 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 PRKAB1Q9Y478 270 aa18.97■□□□□ 0.63
SYNE4-202ENST00000340477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 ARHGEF17Q96PE2 2063 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-202ENST00000340477 HEATR9A2RTY3 570 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 CTAGE9A4FU28 777 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 FAM221BA6H8Z2 402 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 MTX2O75431 263 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 SRP72O76094 671 aaKnown RBP18.96■□□□□ 0.63
SYNE4-202ENST00000340477 ZSCAN5DPP0CG00 497 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 RALBP11234 206 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 GLB1P16278 677 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 MSH3P20585 1137 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 INSM1Q01101 510 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-202ENST00000340477 PTPRCAPQ14761 206 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 CERCAMQ5T4B2 595 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 ZNF648Q5T619 568 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-202ENST00000340477 CCNI2Q6ZMN8 369 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-202ENST00000340477 PRUNE1Q86TP1 453 aa18.96■□□□□ 0.63
SYNE4-202ENST00000340477 GLIS1Q8NBF1 620 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms