RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KHDC1Q4VXA5 237 aaKnown RBP15.12■□□□□ 0.01
PRKN-201ENST00000338468 KCTD11Q693B1 232 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 SLC30A9Q6PML9 568 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 BLOC1S5Q8TDH9 187 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 RTP4Q96DX8 246 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 PLEKHG4BQ96PX9 1271 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 CCDC3Q9BQI4 270 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 FERMT1Q9BQL6 677 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 TMEM121Q9BTD3 319 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 ZSCAN5AQ9BUG6 496 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 FSD1LQ9BXM9 530 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 TLR10Q9BXR5 811 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 GSDMCQ9BYG8 508 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 CARD9Q9H257 536 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 DPEP2Q9H4A9 486 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 IL26Q9NPH9 171 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 RAD18Q9NS91 495 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 ATXN10Q9UBB4 475 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 PRKAB1Q9Y478 270 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 PCDHB1Q9Y5F3 818 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 NTN3O00634 580 aaPredicted RBP15.11■□□□□ 0.01
PRKN-201ENST00000338468 GAPDHSO14556 408 aaPredicted RBP15.11■□□□□ 0.01
PRKN-201ENST00000338468 BUD23O43709 281 aaKnown RBP15.11■□□□□ 0.01
PRKN-201ENST00000338468 LIASO43766 372 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 USP12O75317 370 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 STK10O94804 968 aaKnown RBP15.11■□□□□ 0.01
PRKN-201ENST00000338468 ZNF8P17098 575 aaPredicted RBP15.11■□□□□ 0.01
PRKN-201ENST00000338468 PDX1P52945 283 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 SPARCL1Q14515 664 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 PTPRCAPQ14761 206 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 ATP13A5Q4VNC0 1218 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 C14orf28Q4W4Y0 310 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 ZNF569Q5MCW4 686 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 CERCAMQ5T4B2 595 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 SEL1L2Q5TEA6 688 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 PDPK2PQ6A1A2 396 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 ADGRG6Q86SQ4 1221 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 GALNT13Q8IUC8 556 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 ZDHHC1Q8WTX9 485 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 PATE1Q8WXA2 126 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 SLC39A7Q92504 469 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 ABCG4Q9H172 646 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 HACD3Q9P035 362 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 AAR2Q9Y312 384 aaKnown RBP15.11■□□□□ 0.01
PRKN-201ENST00000338468 RNF215Q9Y6U7 377 aa15.11■□□□□ 0.01
PRKN-201ENST00000338468 A0A1W2PNU3 283 aaPredicted RBP15.1■□□□□ 0.01
PRKN-201ENST00000338468 A0A1W2PQM1 296 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 ATXN7O15265 892 aaPredicted RBP15.1■□□□□ 0.01
PRKN-201ENST00000338468 GPR39O43194 453 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 NUAK1O60285 661 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 CSO75390 466 aaKnown RBP15.1■□□□□ 0.01
PRKN-201ENST00000338468 ZNF189O75820 626 aaPredicted RBP15.1■□□□□ 0.01
PRKN-201ENST00000338468 SLC25A14O95258 325 aaPredicted RBP15.1■□□□□ 0.01
PRKN-201ENST00000338468 ECEL1O95672 775 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 EML2O95834 649 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 GLB1P16278 677 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 ACTR1BP42025 376 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 MAZP56270 477 aaKnown RBP15.1■□□□□ 0.01
PRKN-201ENST00000338468 ACTR1AP61163 376 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 PRPSAP1Q14558 356 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 RTP5Q14D33 572 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 PARP6Q2NL67 630 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 LRRC69Q6ZNQ3 347 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 GLT6D1Q7Z4J2 308 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 NAGSQ8N159 534 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 DTX3LQ8TDB6 740 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 C1orf54Q8WWF1 131 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 ALS2CR12Q96Q35 445 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 NRSN2Q9GZP1 204 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 OR2AG1Q9H205 316 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 KCNF1Q9H3M0 494 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 ARNT2Q9HBZ2 717 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 TRIM39Q9HCM9 518 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 APPL1Q9UKG1 709 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 KCTD3Q9Y597 815 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 ARL5AQ9Y689 179 aa15.1■□□□□ 0.01
PRKN-201ENST00000338468 CHUKO15111 745 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 MTX2O75431 263 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 C1QL1O75973 258 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 SPAM1P38567 509 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
PRKN-201ENST00000338468 CCL7P80098 99 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 LRP8Q14114 963 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 TAF1AQ15573 450 aaPredicted RBP15.09■□□□□ 0.01
PRKN-201ENST00000338468 CHRNA6Q15825 494 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 ISXQ2M1V0 245 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 ARHGEF18Q6ZSZ5 1173 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 ZNF438Q7Z4V0 828 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 ARL14Q8N4G2 192 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 TRIM58Q8NG06 486 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 OR6C4Q8NGE1 309 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 DEPDC7Q96QD5 511 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 VPS35Q96QK1 796 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 TBL1YQ9BQ87 522 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 FRMD8P1Q9BZ68 369 aaPredicted RBP15.09■□□□□ 0.01
PRKN-201ENST00000338468 RMI1Q9H9A7 625 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 LRIT1Q9P2V4 623 aa15.09■□□□□ 0.01
PRKN-201ENST00000338468 ZNF106Q9H2Y7 1883 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms