RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 A0A087WXM4 84 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 PPP6CO00743 305 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 SOX11P35716 441 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 PRKAA1Q13131 559 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
SF1-202ENST00000334944 RTP2Q5QGT7 225 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 LAYNQ6UX15 382 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 CNTN4Q8IWV2 1026 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 ZNF683Q8IZ20 524 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 KDM1BQ8NB78 822 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 CYGBQ8WWM9 190 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
SF1-202ENST00000334944 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 TRIM64CA6NLI5 447 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 RAMP2O60895 175 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 BMP10O95393 424 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 CHEK2O96017 543 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 MATN1P21941 496 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 NME5P56597 212 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 MOGQ16653 247 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 PITRM1Q5JRX3 1037 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 ZFP1Q6P2D0 407 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 GK5Q6ZS86 529 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 SCML4Q8N228 414 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 OR7D4Q8NG98 312 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 SLC45A3Q96JT2 553 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 CCDC138Q96M89 665 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 MUC3BQ9H195 1237 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 DUS2Q9NX74 493 aaKnown RBP13.82□□□□□ -0.2
SF1-202ENST00000334944 NSMCE4AQ9NXX6 385 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 GIMAP2Q9UG22 337 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 GPSM3Q9Y4H4 160 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 PTGDR2Q9Y5Y4 395 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 CPQQ9Y646 472 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 HEATR9A2RTY3 570 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 C9JVG2 144 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 ADAM12O43184 909 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 OPRL1P41146 370 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 C1QTNF8P60827 252 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 NFATC3Q12968 1075 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 BFSP2Q13515 415 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 HECTD2Q5U5R9 776 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
SF1-202ENST00000334944 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 KCTD8Q6ZWB6 473 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 USP43Q70EL4 1123 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 HERC6Q8IVU3 1022 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 UMODL1-AS1Q8N2C9 162 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 DBF4BQ8NFT6 615 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 BHMTQ93088 406 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 FEM1CQ96JP0 617 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 SMOXQ9NWM0 555 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 GNPTGQ9UJJ9 305 aa13.82□□□□□ -0.2
SF1-202ENST00000334944 COPG1Q9Y678 874 aaKnown RBP13.82□□□□□ -0.2
SF1-202ENST00000334944 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 APOA4P06727 396 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 RHOQP17081 205 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 CLCQ05315 142 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 ZNF33AQ06730 810 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 SELENBP1Q13228 472 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 PLCL1Q15111 1095 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 NFE2Q16621 373 aaPredicted RBP13.81□□□□□ -0.2
SF1-202ENST00000334944 RNF180Q86T96 592 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 LGI2Q8N0V4 545 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 PCSK9Q8NBP7 692 aaKnown RBP13.81□□□□□ -0.2
SF1-202ENST00000334944 CGREF1Q99674 301 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 FBXO44Q9H4M3 255 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 TRPV5Q9NQA5 729 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
SF1-202ENST00000334944 ZNF839A8K0R7 811 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 A8MT66 165 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 AP3B1O00203 1094 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 TLR5O60602 858 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 MYL4P12829 197 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 RPS24P62847 133 aaKnown RBP13.81□□□□□ -0.2
SF1-202ENST00000334944 SEMA3AQ14563 771 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 HMBOX1Q6NT76 420 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 CILP2Q8IUL8 1156 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
SF1-202ENST00000334944 PDZD8Q8NEN9 1154 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 ARRDC2Q8TBH0 407 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 ALPK1Q96QP1 1244 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 FAM96AQ9H5X1 160 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 FBRSL1Q9HCM7 1045 aaKnown RBP13.81□□□□□ -0.2
SF1-202ENST00000334944 PALMDQ9NP74 551 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 ATP11BQ9Y2G3 1177 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 VWA8A3KMH1 1905 aa13.81□□□□□ -0.2
SF1-202ENST00000334944 AKAP10O43572 662 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 SIX3O95343 332 aaPredicted RBP13.8□□□□□ -0.2
SF1-202ENST00000334944 VNN2O95498 520 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 HADHAP40939 763 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 KCNC4Q03721 635 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 TNK2Q07912 1038 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 NSUN2Q08J23 767 aaKnown RBP eCLIP13.8□□□□□ -0.2
SF1-202ENST00000334944 C16orf89Q6UX73 402 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms