RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CAPZBP47756 277 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 TNFSF10P50591 281 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 RENBPP51606 427 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 WDR4P57081 412 aaKnown RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 SNX16P57768 344 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 RUNX1T1Q06455 604 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 DPYDQ12882 1025 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 IFT88Q13099 833 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 PIK3R6Q5UE93 754 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 LYPLAL1Q5VWZ2 237 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 ANO1Q5XXA6 986 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 FAM180AQ6UWF9 173 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 ARSKQ6UWY0 536 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 NRROSQ86YC3 692 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 PM20D2Q8IYS1 436 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 FAM98AQ8NCA5 519 aaKnown RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM161BQ8NDZ6 487 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 PLPP5Q8NEB5 264 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 C1orf162Q8NEQ5 155 aaPredicted RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 DNAJB14Q8TBM8 379 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 ASAP3Q8TDY4 903 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 RUFY2Q8WXA3 655 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 CALR3Q96L12 384 aaKnown RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF354BQ96LW1 612 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 CGRRF1Q99675 332 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 GPA33Q99795 319 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 C19orf24Q9BVV8 132 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 EIF2AQ9BY44 585 aaKnown RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM168Q9H0V1 697 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 C6orf106Q9H6K1 298 aaPredicted RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 IL21RQ9HBE5 538 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 CYP4F11Q9HBI6 524 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 NOX4Q9NPH5 578 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 ABCC13Q9NSE7 274 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 HAUS2Q9NVX0 235 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 OSER1Q9NX31 292 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 GPR83Q9NYM4 423 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 FOXJ2Q9P0K8 574 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 GABBR1Q9UBS5 961 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 LIMCH1Q9UPQ0 1083 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 PCDHB1Q9Y5F3 818 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 TRRAPQ9Y4A5 3859 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 KIAA1109Q2LD37 5005 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 RIF1Q5UIP0 2472 aaKnown RBP1.53□□□□□ -2.16
LINC00643-201ENST00000334389 TLN2Q9Y4G6 2542 aa1.53□□□□□ -2.16
LINC00643-201ENST00000334389 PNMA6EA0A0J9YXQ4 647 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 HYKKA2RU49 373 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 C5orf60A6NFR6 353 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 FRG2CA6NGY1 282 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 AGPSO00116 658 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ETV2O00321 342 aaPredicted RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SGSM2O43147 1006 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 COCHO43405 550 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 KDM1AO60341 852 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SLITRK3O94933 977 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 FGF1P05230 155 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 KRT10P13645 584 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 EGR1P18146 543 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 CD9P21926 228 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 MMP11P24347 488 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SOX5P35711 763 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ATP5C1P36542 298 aaKnown RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 TDO2P48775 406 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ANTXR2P58335 489 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 YBEYP58557 167 aaPredicted RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 PDE1BQ01064 536 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 NR6A1Q15406 480 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SGSM1Q2NKQ1 1148 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 TDRD12Q587J7 1177 aaKnown RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 MS4A13Q5J8X5 152 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 PERM1Q5SV97 790 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 IFIT1BQ5T764 474 aaKnown RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ARHGAP40Q5TG30 622 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ICE2Q659A1 982 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 E4F1Q66K89 784 aaPredicted RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 CYB5R2Q6BCY4 276 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF544Q6NX49 715 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 MMS22LQ6ZRQ5 1243 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 MIER3Q7Z3K6 550 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 FAM35AQ86V20 835 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D10CQ8IV04 446 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 EFCAB13Q8IY85 973 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 PDCL2Q8N4E4 241 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 TEX19Q8NA77 164 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 OR10G6Q8NH81 332 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 CPT1BQ92523 772 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 PEX13Q92968 403 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ARHGEF2Q92974 986 aaKnown RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 CCDC74AQ96AQ1 378 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SEH1LQ96EE3 360 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ZDHHC12Q96GR4 267 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 IFT74Q96LB3 600 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SENP8Q96LD8 212 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 CCDC74BQ96LY2 380 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 MIS12Q9H081 205 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 THAP2Q9H0W7 228 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 STN1Q9H668 368 aaKnown RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 ASB8Q9H765 288 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 GPN2Q9H9Y4 310 aaPredicted RBP1.53□□□□□ -2.17
LINC00643-201ENST00000334389 DMAC2Q9NW81 257 aa1.53□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms