RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 DUSP4Q13115 394 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 ZNF177Q13360 481 aaPredicted RBP10.67□□□□□ -0.7
CCDC172-201ENST00000333254 LSAMPQ13449 338 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 BFSP2Q13515 415 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 INPP5AQ14642 412 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 CYTH1Q15438 398 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 INO80DQ53TQ3 878 aaPredicted RBP10.67□□□□□ -0.7
CCDC172-201ENST00000333254 RTP2Q5QGT7 225 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 THEMIS2Q5TEJ8 643 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 IL31Q6EBC2 164 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 SLC15A3Q8IY34 581 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 RNF168Q8IYW5 571 aaPredicted RBP10.67□□□□□ -0.7
CCDC172-201ENST00000333254 MDGA1Q8NFP4 955 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 OR56A4Q8NGH8 313 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 OR9I1Q8NGQ6 314 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 GPR152Q8TDT2 470 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 FBRSL1Q9HCM7 1045 aaKnown RBP10.67□□□□□ -0.7
CCDC172-201ENST00000333254 NMRK2Q9NPI5 230 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 RIC8BQ9NVN3 520 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 PTTG2Q9NZH5 202 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 NUDT4Q9NZJ9 180 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 SRRDQ9UH36 339 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 PCTPQ9UKL6 214 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 CNOT6Q9ULM6 557 aaKnown RBP10.67□□□□□ -0.7
CCDC172-201ENST00000333254 PCDHB1Q9Y5F3 818 aa10.67□□□□□ -0.7
CCDC172-201ENST00000333254 UBA6A0AVT1 1052 aaPredicted RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ANKRD66B4E2M5 251 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 IFRD1O00458 451 aaPredicted RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 NR5A2O00482 541 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 FZD6O60353 706 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 GJB3O75712 270 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 CYBBP04839 570 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 UMPSP11172 480 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ELNP15502 786 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 HDCP19113 662 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RPS3P23396 243 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 SLC6A2P23975 617 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 FOXA1P55317 472 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 POLE2P56282 527 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ERVK-8P63133 956 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TUBA4AP68366 448 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 SP3Q02447 781 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PTPRCAPQ14761 206 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PCBP2Q15366 365 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PTPRNQ16849 979 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 SMU1Q2TAY7 513 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ADGRF1Q5T601 910 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 METTL2BQ6P1Q9 378 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 NCEH1Q6PIU2 408 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 CERS6Q6ZMG9 384 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 FAM156AQ8NDB6 213 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PAPD5Q8NDF8 572 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 FBXO22Q8NEZ5 403 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 CD200R1Q8TD46 325 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TRPC4APQ8TEL6 797 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 LRTOMTQ8WZ04 291 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 SEPT8Q92599 483 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TUBGCP3Q96CW5 907 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 NSMCE3Q96MG7 304 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 GPR21Q99679 349 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 HAUS8Q9BT25 410 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ANKRD60Q9BZ19 345 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RBM38Q9H0Z9 239 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PCDHAC1Q9H158 963 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 STARD7Q9NQZ5 370 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PNPLA3Q9NST1 481 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RNF186Q9NXI6 227 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 THEGQ9P2T0 379 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 AFF4Q9UHB7 1163 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TRMT6Q9UJA5 497 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 LZTS1Q9Y250 596 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 PCDHA9Q9Y5H5 950 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RAI2Q9Y5P3 530 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ST14Q9Y5Y6 855 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ZFC3H1O60293 1989 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 CXorf51AA0A1B0GTR3 108 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ATP6AP2A0A1C7CYW4 349 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 NBNO60934 754 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ATP6AP2O75787 350 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 STC2O76061 302 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 HGFP14210 728 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TCN1P20061 433 aaPredicted RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ATP6V1B2P21281 511 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 FMO4P31512 558 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 SCNN1BP51168 640 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 ARPP19P56211 112 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 IL2P60568 153 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RALGDSQ12967 914 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 GRB7Q14451 532 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TSNQ15631 228 aaKnown RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 GEN1Q17RS7 908 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 TPGS2Q68CL5 300 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 HMBOX1Q6NT76 420 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 DDIASQ8IXT1 998 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 CFAP52Q8N1V2 620 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 LRRC43Q8N309 656 aa10.66□□□□□ -0.7
CCDC172-201ENST00000333254 RYBPQ8N488 228 aaPredicted RBP10.66□□□□□ -0.7
CCDC172-201ENST00000333254 CARNMT1Q8N4J0 409 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms