RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SMG8Q8ND04 991 aaKnown RBP18.06■□□□□ 0.48
PKP3-201ENST00000331563 CLEC4CQ8WTT0 213 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 HEXDCQ8WVB3 486 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 FKBP10Q96AY3 582 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 OR2B2Q9GZK3 357 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 VWA7Q9Y334 891 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 B4GALT4O60513 344 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 AP2A1O95782 977 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 PFKMP08237 780 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 SEPHS1P49903 392 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 YBX1P67809 324 aaKnown RBP18.06■□□□□ 0.48
PKP3-201ENST00000331563 CTAG1AP78358 180 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 DENND6AQ8IWF6 608 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 ELMOD2Q8IZ81 293 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 GTF3C2Q8WUA4 911 aaPredicted RBP18.06■□□□□ 0.48
PKP3-201ENST00000331563 KHSRPQ92945 711 aaKnown RBP eCLIP18.06■□□□□ 0.48
PKP3-201ENST00000331563 HPDLQ96IR7 371 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 KCTD14Q9BQ13 255 aaPredicted RBP18.06■□□□□ 0.48
PKP3-201ENST00000331563 MRPL57Q9BQC6 102 aaKnown RBP18.06■□□□□ 0.48
PKP3-201ENST00000331563 NDUFAF1Q9Y375 327 aa18.06■□□□□ 0.48
PKP3-201ENST00000331563 FAM95CA0A1B0GW59 222 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 TTC24A2A3L6 582 aaPredicted RBP18.05■□□□□ 0.48
PKP3-201ENST00000331563 HSD17B1P14061 328 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 PPP2R2BQ00005 443 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 ILF2Q12905 390 aaKnown RBP18.05■□□□□ 0.48
PKP3-201ENST00000331563 PSMD5Q16401 504 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 RBM48Q5RL73 367 aaKnown RBP18.05■□□□□ 0.48
PKP3-201ENST00000331563 PPP1R26Q5T8A7 1209 aaPredicted RBP18.05■□□□□ 0.48
PKP3-201ENST00000331563 ASCC1Q8N9N2 400 aaKnown RBP18.05■□□□□ 0.48
PKP3-201ENST00000331563 NDNFQ8TB73 568 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 CPNE5Q9HCH3 593 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 PDE10AQ9Y233 779 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 ANK1P16157 1881 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 PPEF2O14830 753 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 AREL1O15033 823 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 HUS1O60921 280 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 MSL3P1P0C860 447 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 LCP1P13796 627 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 MAGP20916 626 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 ETV3P41162 512 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 MEP1AQ16819 746 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 SMU1Q2TAY7 513 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.05■□□□□ 0.488e-6■■■■■ 27.9
PKP3-201ENST00000331563 OSTM1Q86WC4 334 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 DNAJB3Q8WWF6 145 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 CHID1Q9BWS9 393 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 MAGEE1Q9HCI5 957 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 GIMAP2Q9UG22 337 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 SLC45A1Q9Y2W3 748 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 TESMINQ9Y4I5 508 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 SPEF1Q9Y4P9 236 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 ANKRD12Q6UB98 2062 aa18.05■□□□□ 0.48
PKP3-201ENST00000331563 BBIP1A8MTZ0 92 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 FKBP9O95302 570 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SEC24AO95486 1093 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 GSNP06396 782 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 THRBP10828 461 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ARCN1P48444 511 aaKnown RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 GLUD2P49448 558 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ZNF135P52742 658 aaPredicted RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 NFE2Q16621 373 aaPredicted RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 RSBN1Q5VWQ0 802 aaPredicted RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 C7orf31Q8N865 590 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 POC5Q8NA72 575 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 LEMD2Q8NC56 503 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 VMP1Q96GC9 406 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 EMILIN2Q9BXX0 1053 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 TMPRSS4Q9NRS4 437 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SNTG2Q9NY99 539 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 MAGED1Q9Y5V3 778 aaPredicted RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 NDUFS2O75306 463 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 PCNAP12004 261 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 M6PRP20645 277 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 KCNA5P22460 613 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SLC6A2P23975 617 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 AKAP5P24588 427 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ARSFP54793 590 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 CTF1Q16619 201 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 RABL3Q5HYI8 236 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 TJAP1Q5JTD0 557 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ACOT1Q86TX2 421 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 TLK2Q86UE8 772 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 MFSD4AQ8N468 514 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SLC22A17Q8WUG5 538 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 TMEM40Q8WWA1 233 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.04■□□□□ 0.48
PKP3-201ENST00000331563 SDCCAG3Q96C92 435 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 LRRC58Q96CX6 371 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SLC30A3Q99726 388 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 CLPBQ9H078 707 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ALG2Q9H553 416 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 LTB4R2Q9NPC1 389 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 NSMCE4AQ9NXX6 385 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ABCD2Q9UBJ2 740 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 MAGEB16A2A368 324 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 TREHO43280 583 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 KRT8P05787 483 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SMIM10L2AP0DMW4 78 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 SMIM10L2BP0DMW5 78 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms