RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 BOCQ9BWV1 1114 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 BRD9Q9H8M2 597 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 TCF7L2Q9NQB0 619 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 TRMT6Q9UJA5 497 aaKnown RBP16.83■□□□□ 0.28
DDX41-201ENST00000330503 APPL1Q9UKG1 709 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 ZNF106Q9H2Y7 1883 aaKnown RBP16.83■□□□□ 0.28
DDX41-201ENST00000330503 GLYATL1P3A0A0U1RQE8 302 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 LRRC14BA6NHZ5 514 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 B2RBV5 119 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 CHRM1P11229 460 aaPredicted RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 ADH5P11766 374 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 NCF2P19878 526 aaPredicted RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 EPHA3P29320 983 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 HERVK_113P63132 956 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 GALNT1Q10472 559 aaPredicted RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 RIPK1Q13546 671 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 TSNQ15631 228 aaKnown RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 LSM12Q3MHD2 195 aaKnown RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 METTL21CQ5VZV1 264 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 LRRC66Q68CR7 880 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 GDPD4Q6W3E5 623 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 C12orf40Q86WS4 652 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 NPAS3Q8IXF0 933 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 PHTF2Q8N3S3 785 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 PTGR2Q8N8N7 351 aaPredicted RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 STAG3L4Q8TBR4 150 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 STON2Q8WXE9 905 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX41-201ENST00000330503 KLHL32Q96NJ5 620 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 ERVK-6Q9BXR3 956 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 MTG2Q9H4K7 406 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 PRSS21Q9Y6M0 314 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 E9PBE3 544 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 KLHL41O60662 606 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 KERAO60938 352 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 ATP6V1G2O95670 118 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 RPS3P23396 243 aaKnown RBP eCLIP16.82■□□□□ 0.287e-10■■■■□ 20.3
DDX41-201ENST00000330503 SPAM1P38567 509 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 PTPN5P54829 565 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 KDSRQ06136 332 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 USP45Q70EL2 814 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 CUZD1Q86UP6 607 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 TEX9Q8N6V9 391 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 KIAA1958Q8N8K9 716 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 FUBP1Q96AE4 644 aaKnown RBP16.82■□□□□ 0.28
DDX41-201ENST00000330503 GTSE1Q9NYZ3 720 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 DHRS7Q9Y394 339 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 WASF2Q9Y6W5 498 aa16.82■□□□□ 0.28
DDX41-201ENST00000330503 C2orf16Q68DN1 1984 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 AGAP14A8MT82 685 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 NEMP1O14524 444 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 GYG2O15488 501 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 HOXC11O43248 304 aaPredicted RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 ECI2O75521 394 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 SIX3O95343 332 aaPredicted RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 ARSAP15289 507 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 TSPAN8P19075 237 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 ITGALP20701 1170 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 ACRV1P26436 265 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 MESP2Q0VG99 397 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 PDCD2Q16342 344 aaPredicted RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 PFKFB4Q16877 469 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 LRRC73Q5JTD7 316 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 FAM219BQ5XKK7 198 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 FAM13CQ8NE31 585 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 GDPD5Q8WTR4 605 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 HEPHQ9BQS7 1158 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 PBX4Q9BYU1 374 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 NKX2-4Q9H2Z4 354 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 EML4Q9HC35 981 aaKnown RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 CDH22Q9UJ99 828 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 PCDHB1Q9Y5F3 818 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 LAMA3Q16787 3333 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 SPECC1L-ADORA2AF8WAN1 911 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 SUPT7LO94864 414 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 ZNF7P17097 686 aaPredicted RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 DGKGP49619 791 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 IL2P60568 153 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 CPNE9Q8IYJ1 553 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 ST13P5Q8NFI4 369 aaPredicted RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 LINGO1Q96FE5 620 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 ZFYVE19Q96K21 471 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 ASB16Q96NS5 453 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 TRMOQ9BU70 441 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 CCDC28BQ9BUN5 200 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 SFXN1Q9H9B4 322 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 SARS2Q9NP81 518 aaKnown RBP16.81■□□□□ 0.28
DDX41-201ENST00000330503 B4GALT6Q9UBX8 382 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 RNF112Q9ULX5 631 aa16.81■□□□□ 0.28
DDX41-201ENST00000330503 TRANK1O15050 2925 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 OTOL1A6NHN0 477 aaPredicted RBP16.8■□□□□ 0.28
DDX41-201ENST00000330503 GOLGA8CPA6NN73 597 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 SDHDO14521 159 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 DCXO43602 365 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 CTSLP07711 333 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 C1SP09871 688 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 PPARGP37231 505 aaPredicted RBP16.8■□□□□ 0.28
DDX41-201ENST00000330503 SLC6A11P48066 632 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms