RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TUBA1CQ9BQE3 449 aa17.06■□□□□ 0.32
PRKCD-201ENST00000330452 DDX28Q9NUL7 540 aaKnown RBP17.06■□□□□ 0.32
PRKCD-201ENST00000330452 UBP1Q9NZI7 540 aa17.06■□□□□ 0.32
PRKCD-201ENST00000330452 SMIM35A0A1B0GVV1 85 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 MX2P20592 715 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 PIK3R1P27986 724 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 GARSP41250 739 aaKnown RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 HTR2BP41595 481 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 ATXN3P54252 364 aaPredicted RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 ATAD3CQ5T2N8 411 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 PDPK2PQ6A1A2 396 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 ZNF467Q7Z7K2 595 aaPredicted RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 SMG8Q8ND04 991 aaKnown RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 RAB2BQ8WUD1 216 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 DLG3Q92796 817 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 GLT1D1Q96MS3 346 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 SLC2A13Q96QE2 648 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 IFT22Q9H7X7 185 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 LRRC40Q9H9A6 602 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 DNAJC28Q9NX36 388 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 TCAF1Q9Y4C2 921 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 TIMM13Q9Y5L4 95 aaPredicted RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 ZCWPW2A0A1B0GU75 182 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 DEAF1O75398 565 aaPredicted RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 PAHP00439 452 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 GSTM2P28161 218 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 CD68P34810 354 aaPredicted RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 TPI1P60174 286 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 RAD51Q06609 339 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 OR2T3Q8NH03 318 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 PDCD6IPQ8WUM4 868 aaKnown RBP17.05■□□□□ 0.32
PRKCD-201ENST00000330452 TMEM30AQ9NV96 361 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 TOR4AQ9NXH8 423 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 ATP6V1HQ9UI12 483 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 NUP205Q92621 2012 aa17.05■□□□□ 0.32
PRKCD-201ENST00000330452 PDPK1O15530 556 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 AP2A1O95782 977 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 F2P00734 622 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 CENPAP49450 140 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 HARS2P49590 506 aaKnown RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 TNK2Q07912 1038 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 OR6F1Q8NGZ6 308 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 GTF3C2Q8WUA4 911 aaPredicted RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 NXPE3Q969Y0 559 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 MLPHQ9BV36 600 aaPredicted RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 CRTAC1Q9NQ79 661 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 CHRAC1Q9NRG0 131 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 WDR70Q9NW82 654 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 COQ3Q9NZJ6 369 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 BFARQ9NZS9 450 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 SLC45A1Q9Y2W3 748 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 A0A096LPK6 155 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 MBLAC1A4D2B0 266 aaPredicted RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 SPRP35270 261 aaPredicted RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 LIMK2P53671 638 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 SRP54P61011 504 aaKnown RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 AASDHQ4L235 1098 aaPredicted RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 FSCBQ5H9T9 825 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 GNASQ5JWF2 1037 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 FAM171BQ6P995 826 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 TMEM135Q86UB9 458 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 CLYBLQ8N0X4 340 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 TOP6BLQ8N6T0 577 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 LPPQ93052 612 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 USB1Q9BQ65 265 aaKnown RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 PTGESO14684 152 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 BET1O15155 118 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 DCXO43602 365 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 USP17L7P0C7H9 530 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 CD1EP15812 388 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 PSEN2P49810 448 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 FKBP1BP68106 108 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 SNX31Q8N9S9 440 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 MAPK15Q8TD08 544 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 KCTD13Q8WZ19 329 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 EDEM1Q92611 657 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 MAGED4Q96JG8 741 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 DNAI2Q9GZS0 605 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 COG4Q9H9E3 785 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 RPRD1BQ9NQG5 326 aaKnown RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 ACTR3BQ9P1U1 418 aa17.04■□□□□ 0.32
PRKCD-201ENST00000330452 PRPF19Q9UMS4 504 aaKnown RBP17.04■□□□□ 0.32
PRKCD-201ENST00000330452 G3V2L1 256 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 TOR1BO14657 336 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 LTFP02788 710 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 BMP4P12644 408 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 COX4I1P13073 169 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 NFKB1P19838 968 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 GRIK1P39086 918 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 MAGEA12P43365 314 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 CDC42EP1Q00587 391 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 C5orf22Q49AR2 442 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 SLC9B1Q4ZJI4 515 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 CCNJQ5T5M9 372 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms