RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 UPK1AO00322 258 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 IRAK2O43187 625 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 CRHBPP24387 322 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 RXRGP48443 463 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 CLCQ05315 142 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 LCP2Q13094 533 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 DAG1Q14118 895 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 ZNF549Q6P9A3 640 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 THAP5Q7Z6K1 395 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 ATOH8Q96SQ7 321 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 BEGAINQ9BUH8 593 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.64■□□□□ 0.25
SSH1-201ENST00000326470 SLAMF8Q9P0V8 285 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 CACNG4Q9UBN1 327 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 USP22Q9UPT9 525 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
SSH1-201ENST00000326470 V9GYQ6 96 aa16.64■□□□□ 0.25
SSH1-201ENST00000326470 A0A1B0GTL3 188 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 KPNA4O00629 521 aaPredicted RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 KPNA6O60684 536 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 RSL1D1O76021 490 aaKnown RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 PRSS23O95084 383 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 KCNH1O95259 989 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 ALPLP05186 524 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 THRBP10828 461 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 CDH1P12830 882 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 ZNF37AP17032 561 aaPredicted RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 SUOXP51687 545 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 PLA2G16P53816 162 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 EMX2Q04743 252 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 ILF2Q12905 390 aaKnown RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 BTG3Q14201 252 aaPredicted RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 SKIV2LQ15477 1246 aaKnown RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 TAF2Q6P1X5 1199 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 FCRL2Q96LA5 508 aaPredicted RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 ZNF347Q96SE7 839 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 TSPYL2Q9H2G4 693 aaPredicted RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 TFB2MQ9H5Q4 396 aaKnown RBP16.63■□□□□ 0.25
SSH1-201ENST00000326470 HPS4Q9NQG7 708 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 ITGB1BP2Q9UKP3 347 aa16.63■□□□□ 0.25
SSH1-201ENST00000326470 DEAF1O75398 565 aaPredicted RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 SLC22A3O75751 556 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 PEX11BO96011 259 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 C1RP00736 705 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 ENO2P09104 434 aaPredicted RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 UFM1P61960 85 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 R3HCC1LQ7Z5L2 792 aaKnown RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 SPARTQ8N0X7 666 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 RTL3Q8N8U3 475 aaKnown RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 ABHD11Q8NFV4 315 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 PPP1R13LQ8WUF5 828 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 NSMCE2Q96MF7 247 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 ZFP42Q96MM3 310 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 BRINP2Q9C0B6 783 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 INTS7Q9NVH2 962 aaKnown RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 TULP3O75386 442 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 CRCPO75575 148 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 SLC2A3P11169 496 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 SMPD1P17405 629 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 JAK1P23458 1154 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 CD86P42081 329 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 OR4D2P58180 307 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 OXA1LQ15070 435 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 TRIM16LQ309B1 348 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 GLYATQ6IB77 296 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 HDAC2Q92769 488 aaKnown RBP16.62■□□□□ 0.25
SSH1-201ENST00000326470 FKBP10Q96AY3 582 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 LRRC3Q9BY71 257 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 ADNPQ9H2P0 1102 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 POPDC3Q9HBV1 291 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 NT5MQ9NPB1 228 aa16.62■□□□□ 0.25
SSH1-201ENST00000326470 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
SSH1-201ENST00000326470 C16orf96A6NNT2 1141 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 ADM5C9JUS6 153 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 NPPAP01160 153 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 CES1P23141 567 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 EEF1DP29692 281 aaKnown RBP16.61■□□□□ 0.25
SSH1-201ENST00000326470 CCR1P32246 355 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 CASP2P42575 452 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 POLR2JP52435 117 aaKnown RBP16.61■□□□□ 0.25
SSH1-201ENST00000326470 RPS3AP61247 264 aaKnown RBP16.61■□□□□ 0.25
SSH1-201ENST00000326470 ECT2LQ008S8 904 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 C9orf131Q5VYM1 1079 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 BEND5Q7L4P6 421 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 C8orf59Q8N0T1 100 aaPredicted RBP16.61■□□□□ 0.25
SSH1-201ENST00000326470 SCML4Q8N228 414 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 PDZD8Q8NEN9 1154 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 OR6J1Q8NGC5 347 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 SLC22A17Q8WUG5 538 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 DNAJB3Q8WWF6 145 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 TMBIM1Q969X1 311 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 ISG20Q96AZ6 181 aaKnown RBP16.61■□□□□ 0.25
SSH1-201ENST00000326470 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
SSH1-201ENST00000326470 MAGEE1Q9HCI5 957 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms