RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 ARGFXA6NJG6 315 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 IGSF6O95976 241 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 HOXC4P09017 264 aaPredicted RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 VARSP26640 1264 aaKnown RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 IL1R2P27930 398 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 TRIM23P36406 574 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 HCAR3P49019 387 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 SUOXP51687 545 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 CTBSQ01459 385 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 FOXM1Q08050 763 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 DPYSL2Q16555 572 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 UGP2Q16851 508 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 BOLA3Q53S33 107 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 PPP6R3Q5H9R7 873 aaPredicted RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 ERAP2Q6P179 960 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 CNGA4Q8IV77 575 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 RBMXL3Q8N7X1 1067 aaKnown RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 NCSTNQ92542 709 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 SLC38A3Q99624 504 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 ACSS2Q9NR19 701 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 SIDT1Q9NXL6 827 aaKnown RBP13.1□□□□□ -0.31
SYCN-201ENST00000318438 ZNF451Q9Y4E5 1061 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 PLEKHM1Q9Y4G2 1056 aa13.1□□□□□ -0.31
SYCN-201ENST00000318438 PRSS44E7EML9 344 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 MYO1FO00160 1098 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 DAPK3O43293 454 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 DPM1O60762 260 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 KIAA0754O94854 1291 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 CEACAM5P06731 702 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 TCF4P15884 667 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 ERCC2P18074 760 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 RHOAP61586 193 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 SLC25A11Q02978 314 aaKnown RBP13.09□□□□□ -0.31
SYCN-201ENST00000318438 CDK18Q07002 472 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 DPYSQ14117 519 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
SYCN-201ENST00000318438 CHRNA6Q15825 494 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 ZSWIM9Q86XI8 627 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 CISD2Q8N5K1 135 aaKnown RBP13.09□□□□□ -0.31
SYCN-201ENST00000318438 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 CT55Q8WUE5 264 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 TEKT4Q8WW24 435 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
SYCN-201ENST00000318438 PNPLA2Q96AD5 504 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 EXOC2Q96KP1 924 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 KLC2Q9H0B6 622 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 ING2Q9H160 280 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYCN-201ENST00000318438 TRNAU1APQ9NX07 287 aaKnown RBP13.09□□□□□ -0.31
SYCN-201ENST00000318438 CWC15Q9P013 229 aaKnown RBP13.09□□□□□ -0.31
SYCN-201ENST00000318438 UVRAGQ9P2Y5 699 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 LCMT1Q9UIC8 334 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
SYCN-201ENST00000318438 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 H3BRJ5 948 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 BUB1BO60566 1050 aaPredicted RBP13.08□□□□□ -0.32
SYCN-201ENST00000318438 MAP3K6O95382 1288 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 H2AFZP0C0S5 128 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 MYCLP1P12525 358 aaPredicted RBP13.08□□□□□ -0.32
SYCN-201ENST00000318438 GM2AP17900 193 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 ARL4AP40617 200 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 ACTR1BP42025 376 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 MAPK9P45984 424 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 ACTR1AP61163 376 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 RPS18P62269 152 aaKnown RBP13.08□□□□□ -0.32
SYCN-201ENST00000318438 ZRSR2Q15696 482 aaKnown RBP13.08□□□□□ -0.32
SYCN-201ENST00000318438 PNCKQ6P2M8 343 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 H2AFVQ71UI9 128 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 ARHGAP12Q8IWW6 846 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 LZTR1Q8N653 840 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 NPWQ8N729 165 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 HSPH1Q92598 858 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
SYCN-201ENST00000318438 ELMO2Q96JJ3 720 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
SYCN-201ENST00000318438 LNPEPQ9UIQ6 1025 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 ATP8A1Q9Y2Q0 1164 aa13.08□□□□□ -0.32
SYCN-201ENST00000318438 TSPAN11A1L157 253 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 PDE2AO00408 941 aaPredicted RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 LRRTM2O43300 516 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 AKR1B10O60218 316 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 PRAMEF11O60813 436 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 ZG16O60844 167 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 NDUFA10O95299 355 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 RECKO95980 971 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 TMEM253P0C7T8 217 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 RARAP10276 462 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms