RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 NEURL2Q9BR09 285 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 C9orf16Q9BUW7 83 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 MRGBPQ9NV56 204 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 FADS3Q9Y5Q0 445 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 CHD7Q9P2D1 2997 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 PATJQ8NI35 1801 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 TLR5O60602 858 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 GJB5O95377 273 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 IL10P22301 178 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 CSHL1Q14406 222 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 INPP5AQ14642 412 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 NR1D2Q14995 579 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 MOGQ16653 247 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 UGP2Q16851 508 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 MANEALQ5VSG8 457 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 RETREG3Q86VR2 466 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 CMTR2Q8IYT2 770 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 IGSF8Q969P0 613 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 SOX17Q9H6I2 414 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 MTF2Q9Y483 593 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 CORINQ9Y5Q5 1042 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 ZBBXA8MT70 800 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 EI24O14681 340 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 PSMA4P25789 261 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 MAP4P27816 1152 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 OXTRP30559 389 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 POU6F1Q14863 301 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 CLEC6AQ6EIG7 209 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 ZC3H7AQ8IWR0 971 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC15A4Q8N697 577 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 TERB1Q8NA31 727 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 CHPT1Q8WUD6 406 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 ACDQ96AP0 544 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 KIFC1Q9BW19 673 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 COL4A4P53420 1690 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 BPTFQ12830 3046 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 TSPAN8P19075 237 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 CDH3P22223 829 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 DNAJB13P59910 316 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 GNA12Q03113 381 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 TNK2Q07912 1038 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 NFATC3Q12968 1075 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 ATP6AP1Q15904 470 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 HACD2Q6Y1H2 254 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 KDELC2Q7Z4H8 507 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 FUNDC1Q8IVP5 155 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 PHF21BQ96EK2 531 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF558Q96NG5 402 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 EML4Q9HC35 981 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 HACD3Q9P035 362 aa17.09■□□□□ 0.33
SCAMP4-201ENST00000316097 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 NR5A2O00482 541 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 SOD2P04179 222 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 STX1BP61266 288 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 EGFLAMQ63HQ2 1017 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 NAPEPLDQ6IQ20 393 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC39A11Q8N1S5 342 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 CFAP52Q8N1V2 620 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 PCYOX1LQ8NBM8 494 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 ZUFSPQ96AP4 578 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 ARMC5Q96C12 935 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 SPATA17Q96L03 361 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 YME1L1Q96TA2 773 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 TRIM15Q9C019 465 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 GKN1Q9NS71 199 aa17.08■□□□□ 0.33
SCAMP4-201ENST00000316097 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 AQP12BA6NM10 295 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 SOBPA7XYQ1 873 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 A8MT66 165 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 SNAP91O60641 907 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 DNAJB1P25685 340 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 CCT8P50990 548 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC12A2P55011 1212 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 PLCL1Q15111 1095 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 KIF19Q2TAC6 998 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 FBXL22Q6P050 247 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 MSANTD2Q6P1R3 559 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 AQP12AQ8IXF9 295 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 ZNF461Q8TAF7 563 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 CENPNQ96H22 339 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 RC3H2Q9HBD1 1191 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 GNPTGQ9UJJ9 305 aa17.08■□□□□ 0.32
SCAMP4-201ENST00000316097 C9JVG2 144 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 BAIAP3O94812 1187 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 CCNA2P20248 432 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC1A2P43004 574 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 CAPRIN1Q14444 709 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 FAM83EQ2M2I3 478 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 RGS21Q2M5E4 152 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 NIPAL1Q6NVV3 410 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 GALNT18Q6P9A2 607 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 DHRSXQ8N5I4 330 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms