RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TMPRSS11EQ9UL52 423 aa7.81□□□□□ -1.16
CDC42-201ENST00000315554 CNOT6Q9ULM6 557 aaKnown RBP7.81□□□□□ -1.16
CDC42-201ENST00000315554 PRKAB1Q9Y478 270 aa7.81□□□□□ -1.16
CDC42-201ENST00000315554 OAS3Q9Y6K5 1087 aaKnown RBP7.81□□□□□ -1.16
CDC42-201ENST00000315554 CACNA1EQ15878 2313 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 GLYATL1P3A0A0U1RQE8 302 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 RGSL1A5PLK6 1076 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 OR51F1A6NGY5 319 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 KIF2AO00139 706 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 DNALI1O14645 258 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 BANF1O75531 89 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 RASGRP1O95267 797 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 PRAMEF1O95521 474 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 FUCA1P04066 466 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 CEACAM5P06731 702 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 MYF5P13349 255 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 CD59P13987 128 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 SNRPBP14678 240 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 TPSB2P20231 275 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 HTR1BP28222 390 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 EPHA8P29322 1005 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 GNPDA1P46926 289 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 ARRB1P49407 418 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 CDKN1CP49918 316 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 ARSDP51689 593 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 PPARDQ03181 441 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 PTK2BQ14289 1009 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 TPSAB1Q15661 275 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 ATP13A5Q4VNC0 1218 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 KHDC1Q4VXA5 237 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 PRRT3Q5FWE3 981 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 RNASEH2BQ5TBB1 312 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 CES3Q6UWW8 571 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 CAND1Q86VP6 1230 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 DCP2Q8IU60 420 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 MPP5Q8N3R9 675 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 TRAM1L1Q8N609 369 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 ZSCAN1Q8NBB4 408 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 DEFB124Q8NES8 71 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 KIF18AQ8NI77 898 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 GDAP1Q8TB36 358 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 FAM174AQ8TBP5 190 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 SETD7Q8WTS6 366 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 OR2AG1Q9H205 316 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 CHRAC1Q9NRG0 131 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 DNAAF2Q9NVR5 837 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 KCTD5Q9NXV2 234 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 FEZ2Q9UHY8 353 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 CDV3Q9UKY7 258 aaKnown RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 SUFUQ9UMX1 484 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 SNX24Q9Y343 169 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 PLEKHM1Q9Y4G2 1056 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 PCYT1BQ9Y5K3 369 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 MRFAP1Q9Y605 127 aa7.8□□□□□ -1.16
CDC42-201ENST00000315554 TP53BP1Q12888 1972 aaPredicted RBP7.8□□□□□ -1.16
CDC42-201ENST00000315554 PRSS38A1L453 326 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 EFCAB8A8MWE9 144 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 FOXD2O60548 495 aaPredicted RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 PIAS2O75928 621 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 SLC25A14O95258 325 aaPredicted RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 CSF2P04141 144 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 NME1P15531 152 aaKnown RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 DGKAP23743 735 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 IVDP26440 423 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 MC4RP32245 332 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 MAGEA6P43360 314 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 HK3P52790 923 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 ITGA8P53708 1063 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 DCDC1P59894 354 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 ARHGAP8P85298 464 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 XIAPP98170 497 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 SLC7A5Q01650 507 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 CKAP4Q07065 602 aaKnown RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 PEX6Q13608 980 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 DHX34Q14147 1143 aaKnown RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 WHAMMP3Q1A5X7 153 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 DEFB133Q30KQ1 61 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 PLA2G4EQ3MJ16 856 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 ZRANB3Q5FWF4 1079 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 TSTD2Q5T7W7 516 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 CASC4Q6P4E1 433 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 LRRC8BQ6P9F7 803 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 CRTC3Q6UUV7 619 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 TAS2R42Q7RTR8 314 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 PPIL6Q8IXY8 311 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 AGGF1Q8N302 714 aaeCLIP7.79□□□□□ -1.16
CDC42-201ENST00000315554 SLC25A45Q8N413 288 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 EID2Q8N6I1 236 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 NAT8LQ8N9F0 302 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 ZNF548Q8NEK5 533 aaPredicted RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 PPHLN1Q8NEY8 458 aaKnown RBP7.79□□□□□ -1.16
CDC42-201ENST00000315554 CCL4L1Q8NHW4 92 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 ZNF398Q8TD17 642 aa7.79□□□□□ -1.16
CDC42-201ENST00000315554 RHBDD1Q8TEB9 315 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms