RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SQLEQ14534 574 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 NSMCE2Q96MF7 247 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 C1orf50Q9BV19 199 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 DTNAQ9Y4J8 743 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 UBXN8O00124 270 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 NIPSNAP2O75323 286 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 MGAT3Q09327 533 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 C22orf39Q6P5X5 142 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 VITQ6UXI7 678 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 ZNF621Q6ZSS3 439 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 HORMAD1Q86X24 394 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 SIDT2Q8NBJ9 832 aaKnown RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 OTUB2Q96DC9 234 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 ATG10Q9H0Y0 220 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 IMP3Q9NV31 184 aaKnown RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 NDRG2Q9UN36 371 aaKnown RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 TIMM22Q9Y584 194 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 C15orf38-AP3S2A0A0A6YYH1 394 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 NEMP2A6NFY4 417 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 SLC31A1O15431 190 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 ZSCAN9O15535 394 aaPredicted RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 ADAM12O43184 909 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 TGDSO95455 350 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 RB1P06400 928 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 ANXA11P50995 505 aaKnown RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 SH3BGRP55822 239 aaPredicted RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 ARPINQ7Z6K5 226 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 CLNKQ7Z7G1 428 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 CFAP206Q8IYR0 622 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 BEND7Q8N7W2 519 aaPredicted RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 CYGBQ8WWM9 190 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 ESAMQ96AP7 390 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 IMP4Q96G21 291 aaKnown RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 MMADHCQ9H3L0 296 aaPredicted RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 E7ESA3 106 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 FSBPO95073 299 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 CLDN7O95471 211 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 HSPA7P48741 367 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 KCNJ2P63252 427 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 SLC8B1Q6J4K2 584 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 BRAT1Q6PJG6 821 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 CYP2R1Q6VVX0 501 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 RTN4RL1Q86UN2 441 aaPredicted RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 MMAAQ8IVH4 418 aaKnown RBP13.59□□□□□ -0.23
DDX54-202ENST00000314045 RIN3Q8TB24 985 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 CLSTN3Q9BQT9 956 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 PACSIN3Q9UKS6 424 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 TUBGCP6Q96RT7 1819 aa13.59□□□□□ -0.23
DDX54-202ENST00000314045 ZNF682O95780 498 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 CA3P07451 260 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 IRF9Q00978 393 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 PLOD1Q02809 727 aaPredicted RBP13.58□□□□□ -0.23
DDX54-202ENST00000314045 KLC1Q07866 573 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 PTPRCAPQ14761 206 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 CCDC157Q569K6 752 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 KIAA0319Q5VV43 1072 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 TRNP1Q6NT89 227 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 TMEM220Q6QAJ8 160 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 DHFR2Q86XF0 187 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 HERVK_113Q902F9 699 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 IL12RB2Q99665 862 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 CD248Q9HCU0 757 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 TRPC4Q9UBN4 977 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 SNX8Q9Y5X2 465 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 USP3Q9Y6I4 520 aa13.58□□□□□ -0.23
DDX54-202ENST00000314045 CEP290O15078 2479 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 HNF4AP41235 474 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 NAE1Q13564 534 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 CHRNA6Q15825 494 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 VWA5B1Q5TIE3 1220 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 ZNF556Q9HAH1 456 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 COX7A2P14406 83 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 ZNF23P17027 643 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 IL4RP24394 825 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 ECHS1P30084 290 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 GKP32189 559 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 RFX3P48380 749 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 FAM189BP81408 668 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 CLCQ05315 142 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 RALGPS1Q5JS13 557 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 TPRG1Q6ZUI0 275 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 ZNF555Q8NEP9 628 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
DDX54-202ENST00000314045 SEPHS2Q99611 448 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 IPPKQ9H8X2 491 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 SPHK2Q9NRA0 654 aa13.58□□□□□ -0.24
DDX54-202ENST00000314045 IQCF5A8MTL0 148 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 ISM1B1AKI9 464 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 WNT9AO14904 365 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 PIK3R1P27986 724 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 MAT2AP31153 395 aaKnown RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 LMAN2Q12907 356 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 RAB41Q5JT25 222 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 PDE12Q6L8Q7 609 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms