RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TRABD2AQ86V40 505 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 FITM2Q8N6M3 262 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 GALNT6Q8NCL4 622 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 OR52K1Q8NGK4 314 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 KCTD4Q8WVF5 259 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 HAVCR1Q96D42 359 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 C11orf24Q96F05 449 aaPredicted RBP8.15□□□□□ -1.1
VPS41-202ENST00000310301 NXF3Q9H4D5 531 aaKnown RBP8.15□□□□□ -1.1
VPS41-202ENST00000310301 ZNF576Q9H609 170 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 RASSF1Q9NS23 344 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 MARCH2Q9P0N8 246 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 NUP50Q9UKX7 468 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 USP54Q70EL1 1684 aa8.15□□□□□ -1.1
VPS41-202ENST00000310301 GSAPA4D1B5 854 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 ENPP3O14638 875 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 HMGB3O15347 200 aaKnown RBP8.15□□□□□ -1.11
VPS41-202ENST00000310301 OR10H3O60404 316 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 TSPAN1O60635 241 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 SHOX2O60902 331 aaPredicted RBP8.15□□□□□ -1.11
VPS41-202ENST00000310301 ZNF432O94892 652 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 SERPINF2P08697 491 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 LINC00032P0C843 101 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 TSHRP16473 764 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 BDNFP23560 247 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 FAUP35544 74 aaKnown RBP8.15□□□□□ -1.11
VPS41-202ENST00000310301 CEBPGP53567 150 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 DRG2P55039 364 aaKnown RBP8.15□□□□□ -1.11
VPS41-202ENST00000310301 GTF2BQ00403 316 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 MTAPQ13126 283 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 PTPN20Q4JDL3 420 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 SCIMPQ6UWF3 145 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 RASSF5Q8WWW0 418 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 SELENOMQ8WWX9 145 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 ZC3H10Q96K80 434 aaKnown RBP8.15□□□□□ -1.11
VPS41-202ENST00000310301 NELL2Q99435 816 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 NMUR2Q9GZQ4 415 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 TSPAN16Q9UKR8 245 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 ADAMTS5Q9UNA0 930 aa8.15□□□□□ -1.11
VPS41-202ENST00000310301 SMIM28A0A1B0GU29 152 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CHURC1-FNTBB4DL54 471 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 GNB5O14775 395 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 NR2F6P10588 404 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 NFKB1P19838 968 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 AZGP1P25311 298 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 PSMB4P28070 264 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PIK3CGP48736 1102 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SMU1Q2TAY7 513 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ATP13A5Q4VNC0 1218 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 KHDC1Q4VXA5 237 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 OGFOD2Q6N063 350 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TFAP2DQ7Z6R9 452 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 UBE2J2Q8N2K1 259 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CDYL2Q8N8U2 506 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PRELID2Q8N945 189 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 MCOLN3Q8TDD5 553 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 NELL1Q92832 810 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CERS2Q96G23 380 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 LRRC19Q9H756 370 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 NDRG2Q9UN36 371 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 PRAMEF33A0A0G2JMD5 474 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 OR14I1A6ND48 311 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ARL5CA6NH57 179 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PRAMEF10O60809 474 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 DNTTP04053 509 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ENO2P09104 434 aaPredicted RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 PEX2P28328 305 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 RPL22P35268 128 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 ARHGDIBP52566 201 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 AQP4P55087 323 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SULT2A1Q06520 285 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CBWD6Q4V339 395 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CYP20A1Q6UW02 462 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 RPTNQ6XPR3 784 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 KCTD8Q6ZWB6 473 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 EGFL6Q8IUX8 553 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SCAIQ8N9R8 606 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TRPV3Q8NET8 790 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 STAG3L4Q8TBR4 150 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 EDEM1Q92611 657 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TOP1MTQ969P6 601 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 KCNS3Q9BQ31 491 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 C2orf49Q9BVC5 232 aaPredicted RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 CATSPERZQ9NTU4 200 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ANGPT4Q9Y264 503 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TNPO3Q9Y5L0 923 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 CLUHO75153 1309 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TMEM150BA6NC51 233 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 WWP2O00308 870 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 BCKDKO14874 412 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CA3P07451 260 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 MAGEA2P43356 314 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 THOP1P52888 689 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 EFR3AQ14156 821 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PIK3R6Q5UE93 754 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 HJURPQ8NCD3 748 aaPredicted RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 FAM124BQ9H5Z6 455 aaPredicted RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 GJD2Q9UKL4 321 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 MAFFQ9ULX9 164 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms