RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 HGFP14210 728 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNF8P17098 575 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 CD1CP29017 333 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 HMGCLP35914 325 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 MLLT3P42568 568 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 FASLGP48023 281 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 SOWAHCQ53LP3 525 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 ALS2CLQ60I27 953 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 SFRP1Q8N474 314 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 SLC37A2Q8TED4 501 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 DESI2Q9BSY9 194 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 ZSCAN5AQ9BUG6 496 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 CARD9Q9H257 536 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 SEMA6CQ9H3T2 930 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 RDH14Q9HBH5 336 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 THSD1Q9NS62 852 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 KLHL8Q9P2G9 620 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 TBC1D29Q9UFV1 150 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 GAPDHSO14556 408 aaPredicted RBP19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 PLD2O14939 933 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 ITGA2BP08514 1039 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 CSF2RBP32927 897 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 UGT1A5P35504 534 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 EIF3IQ13347 325 aaKnown RBP19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 MSLNQ13421 630 aaPredicted RBP19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 SQSTM1Q13501 440 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 SLC1A5Q15758 541 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 PDPK2PQ6A1A2 396 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 PID1Q7Z2X4 250 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 ADGRG6Q86SQ4 1221 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 KLHDC8BQ8IXV7 354 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 GLYATL1Q969I3 302 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 TMEM74Q96NL1 305 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 FAM118BQ9BPY3 351 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 NUDT22Q9BRQ3 303 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 SPATA16Q9BXB7 569 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 GPR63Q9BZJ6 419 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 GBA3Q9H227 469 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 RMI1Q9H9A7 625 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 EPB41L5Q9HCM4 733 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 TRIM39Q9HCM9 518 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 IL17CQ9P0M4 197 aa19.61■□□□□ 0.73
PDZRN3-202ENST00000308537 IGHV1OR21-1A0A087WYE8 117 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 DDX3YO15523 660 aaKnown RBP19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 RRP8O43159 456 aaKnown RBP19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 TNFSF15O95150 251 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 CPNE6O95741 557 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 SLC4A1P02730 911 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 ADRA1AP35348 466 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 GPR3P46089 330 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 RWDD2BP57060 319 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 MPP3Q13368 585 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 C16orf72Q14CZ0 275 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNF569Q5MCW4 686 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 RAB11FIP2Q7L804 512 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 CHST15Q7LFX5 561 aaPredicted RBP19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNF547Q8IVP9 402 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 DTX3LQ8TDB6 740 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 PLEKHG4BQ96PX9 1271 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 OR2AG1Q9H205 316 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 BPIFA1Q9NP55 256 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 IL26Q9NPH9 171 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 IMPACTQ9P2X3 320 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 SLC23A2Q9UGH3 650 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNHIT2Q9UHR6 403 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 TRHDEQ9UKU6 1024 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 KCNK6Q9Y257 313 aa19.6■□□□□ 0.73
PDZRN3-202ENST00000308537 SDK2Q58EX2 2172 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 GRID2O43424 1007 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 IPO7O95373 1038 aaKnown RBP19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 ACP5P13686 325 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 ETV5P41161 510 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 CLCNKAP51800 687 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 KLF1Q13351 362 aaPredicted RBP19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 OLIG2Q13516 323 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 ATP13A5Q4VNC0 1218 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 LRRC69Q6ZNQ3 347 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 C11orf96Q7Z7L8 435 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 FBXO39Q8N4B4 442 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 SLC25A41Q8N5S1 370 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 IPMKQ8NFU5 416 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 NAF1Q96HR8 494 aaKnown RBP19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 VPS35Q96QK1 796 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 SRPK1Q96SB4 655 aaKnown RBP19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 TRABDQ9H4I3 376 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 RAD18Q9NS91 495 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 ACSL6Q9UKU0 697 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 PACSIN2Q9UNF0 486 aaPredicted RBP19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 PCDHGA7Q9Y5G6 932 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 CAPN6Q9Y6Q1 641 aa19.59■□□□□ 0.73
PDZRN3-202ENST00000308537 KALRNO60229 2985 aa19.58■□□□□ 0.73
PDZRN3-202ENST00000308537 CFAP46Q8IYW2 2715 aa19.58■□□□□ 0.73
PDZRN3-202ENST00000308537 IGHV5-10-1A0A0J9YXX1 117 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 RHPN2P1A8MT19 583 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 TMX2-CTNND1H3BSU7 103 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 H7C0C1 242 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 GPR39O43194 453 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 MTX2O75431 263 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 SLC25A14O95258 325 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms