RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TCF4P15884 667 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 NPR3P17342 541 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 NMBRP28336 390 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SERPINA4P29622 427 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 EPHX2P34913 555 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 CDH12P55289 794 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ACAP2Q15057 778 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 VPS72Q15906 364 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TWIST2Q8WVJ9 160 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 A8MUA0 341 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ECDO95905 644 aaPredicted RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 C2orf80Q0P641 193 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 APLFQ8IW19 511 aaPredicted RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 OR10H4Q8NGA5 316 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 PTCD3Q96EY7 689 aaKnown RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 PIWIL1Q96J94 861 aaKnown RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 COQ10BQ9H8M1 238 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ZNF69Q9UC07 566 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 A0A1B0GV50 99 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 DIRAS1O95057 198 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 CYP1A1P04798 512 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 GJA8P48165 433 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 BTN3A2P78410 334 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 TMEM110Q86TL2 294 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 FAM83AQ86UY5 434 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 PANX3Q96QZ0 392 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 NAT9Q9BTE0 207 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 RGS17Q9UGC6 210 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 IQSEC2Q5JU85 1478 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 SSX5O60225 188 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 VPS4BO75351 444 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 GIMD1P0DJR0 217 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 PTPRAP18433 802 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 CWF19L1Q69YN2 538 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 PCDHB18PQ96TA0 734 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 GIT1Q9Y2X7 761 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 IFNA6P05013 189 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 RPL5P46777 297 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 CREB5Q02930 508 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 GNA13Q14344 377 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 ITIH5Q86UX2 942 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 FITM2Q8N6M3 262 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 B3GNT4Q9C0J1 378 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 TRHDEQ9UKU6 1024 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 NUP50Q9UKX7 468 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 ARL5AQ9Y689 179 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 ASTN2O75129 1339 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 hCG_1818297A0A087WSY0 165 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 SIGLEC16A6NMB1 481 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 DNM1LO00429 736 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 HDCP19113 662 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 CD52P31358 61 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 PSMD8P48556 350 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 PSEN2P49810 448 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 RAVER1Q8IY67 606 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 TMEM216Q9P0N5 145 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 RIMKLBQ9ULI2 386 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 GRIP1Q9Y3R0 1128 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 CFAP20Q9Y6A4 193 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 SLC28A1O00337 649 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 MFSD11O43934 449 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 CYP1A2P05177 515 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 FSCN1Q16658 493 aaKnown RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
USP38-201ENST00000307017 GPR180Q86V85 440 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 PIGZQ86VD9 579 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 GAL3ST4Q96RP7 486 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 COPS8Q99627 209 aa12.57□□□□□ -0.4
USP38-201ENST00000307017 TLR5O60602 858 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 STX11O75558 287 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 OAZ2O95190 189 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 LHCGRP22888 699 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 AVPR1BP47901 424 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 WNT8BQ93098 351 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 RPL10LQ96L21 214 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 OSBPL11Q9BXB4 747 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 POLE3Q9NRF9 147 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 ATXN10Q9UBB4 475 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 CAMSAP1Q5T5Y3 1602 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 STAT5AP42229 794 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 NDUFV1P49821 464 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 ROR2Q01974 943 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 THOC7Q6I9Y2 204 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms