RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TMEM199Q8N511 208 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 TMEM138Q9NPI0 162 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 IDH3BO43837 385 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 CLCNKBP51801 687 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 CLCQ05315 142 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 WDR12Q9GZL7 423 aaKnown RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 IPPKQ9H8X2 491 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 C8orf4Q9NR00 106 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 FBXL21Q9UKT6 434 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 C9JVG2 144 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 MGRN1O60291 552 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 TACR2P21452 398 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 IGFBP5P24593 272 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SSR2P43308 183 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 GDF10P55107 478 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 IL23RQ5VWK5 629 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 EVLQ9UI08 416 aaPredicted RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 UBE2QL1A1L167 161 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 C2CD4BA6NLJ0 364 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SERPINA1P01009 418 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 LIPEQ05469 1076 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 CACNG1Q06432 222 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 C17orf64Q86WR6 236 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 HEXDCQ8WVB3 486 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 TIFAQ96CG3 184 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 LMAN2LQ9H0V9 348 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 FER1L4A9Z1Z3 1794 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 FPGTO14772 594 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 GRM6O15303 877 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SMARCB1Q12824 385 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 MCFD2Q8NI22 146 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 HSD3B7Q9H2F3 369 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 IMP3Q9NV31 184 aaKnown RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 STK16O75716 305 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 ASGR1P07306 291 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 ZDHHC20Q5W0Z9 365 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 PEG10Q86TG7 708 aaKnown RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 STXBP5LQ9Y2K9 1186 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SLC27A6Q9Y2P4 619 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SHPRHQ149N8 1683 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 KHDRBS3O75525 346 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SLC25A12O75746 678 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 ECDO95905 644 aaPredicted RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 MT-CYBP00156 380 aaPredicted RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 MT-ND1P03886 318 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 CDH3P22223 829 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SULT2A1Q06520 285 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 LINGO4Q6UY18 593 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 DENND6AQ8IWF6 608 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SCAIQ8N9R8 606 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 BORCS5Q969J3 196 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 RBM4BQ9BQ04 359 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 PPIEQ9UNP9 301 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 BCKDKO14874 412 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 UGT2B4P06133 528 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 ESRP1Q6NXG1 681 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 THAP5Q7Z6K1 395 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 OSBPL7Q9BZF2 842 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SLC25A51Q9H1U9 297 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 GTPBP1O00178 669 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 IDH3AP50213 366 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 HADHBP55084 474 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 LCP2Q13094 533 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 NEK5Q6P3R8 708 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 AZIN2Q96A70 460 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 AGAP2Q99490 1192 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 MUC13Q9H3R2 512 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 NUDT4Q9NZJ9 180 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SNX10Q9Y5X0 201 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 ELOVL7A1L3X0 281 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SPAM1P38567 509 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 NOL9Q5SY16 702 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SIX2Q9NPC8 291 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 CNOT6Q9ULM6 557 aaKnown RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 MATN3O15232 486 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 CLDN9O95484 217 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 FGBP02675 491 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 PRDX6P30041 224 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 HTR7P34969 479 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 PPM1AP35813 382 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF460Q14592 562 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 TAC4Q86UU9 113 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 PARGQ86W56 976 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 PCED1BQ96HM7 432 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 ALG2Q9H553 416 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 IQCF5A8MTL0 148 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 PLOD3O60568 738 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 CBFA2T3O75081 653 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 HSPA7P48741 367 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 LBX2Q6XYB7 198 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 C2orf73Q8N5S3 287 aaPredicted RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 TTLL2Q9BWV7 592 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 UNC93B1Q9H1C4 597 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 C3orf14Q9HBI5 128 aa13.85□□□□□ -0.19
PRKCB-201ENST00000303531 SMPD3Q9NY59 655 aaPredicted RBP13.85□□□□□ -0.19
PRKCB-201ENST00000303531 KLRG2A4D1S0 409 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms