RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 HSPA1AP0DMV8 641 aaKnown RBP19.27■□□□□ 0.68
HOXC4-201ENST00000303406 HSPA1BP0DMV9 641 aaKnown RBP19.27■□□□□ 0.68
HOXC4-201ENST00000303406 GFAPP14136 432 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 ITGAXP20702 1163 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 WEE1P30291 646 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 ATP4BP51164 291 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 CLCN7P51798 805 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 PTPRRQ15256 657 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 CRY1Q16526 586 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 ANKS6Q68DC2 871 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 NXNQ6DKJ4 435 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 USP45Q70EL2 814 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 OR6K2Q8NGY2 324 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 FUBP1Q96AE4 644 aaKnown RBP19.27■□□□□ 0.68
HOXC4-201ENST00000303406 SCRN2Q96FV2 425 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 BBS2Q9BXC9 721 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 TNKS2Q9H2K2 1166 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 SLC7A8Q9UHI5 535 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 GNPTGQ9UJJ9 305 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 L3MBTL1Q9Y468 752 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 MEI4A8MW99 385 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SUPT3HB4E1H0 165 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SUPT3HO75486 399 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 PRAMEF1O95521 474 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 GNAZP19086 355 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 CHRM3P20309 590 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 CTSOP43234 321 aaPredicted RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 ACTR3P61158 418 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SLC25A3Q00325 362 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 NFATC2Q13469 925 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 CUL3Q13618 768 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 CYLC2Q14093 348 aaPredicted RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SQLEQ14534 574 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 MAPRE2Q15555 327 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 TSNQ15631 228 aaKnown RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 PFKFB4Q16877 469 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SLC5A9Q2M3M2 681 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 KHDC1Q4VXA5 237 aaKnown RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 ASTLQ6HA08 431 aaPredicted RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 C16orf89Q6UX73 402 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SERPINA9Q86WD7 417 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SPNS2Q8IVW8 549 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 DNAJC5GQ8N7S2 189 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SIDT2Q8NBJ9 832 aaKnown RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 GIMAP7Q8NHV1 300 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 MICAL1Q8TDZ2 1067 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 WDR60Q8WVS4 1066 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 LINGO1Q96FE5 620 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SAMD11Q96NU1 681 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 CLPBQ9H078 707 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 PRPF19Q9UMS4 504 aaKnown RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 COPG1Q9Y678 874 aaKnown RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.26■□□□□ 0.67
HOXC4-201ENST00000303406 NOTCH4Q99466 2003 aa19.26■□□□□ 0.67
HOXC4-201ENST00000303406 GLYATL1P3A0A0U1RQE8 302 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 NEDD8-MDP1E9PL57 170 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CDK14O94921 469 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 PAPLNO95428 1278 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 PSMG1O95456 288 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CLDN7O95471 211 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 EPCAMP16422 314 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 BPIP17213 487 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 ACRV1P26436 265 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 STK19P49842 368 aaPredicted RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 LBX1P52954 281 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 ECT2LQ008S8 904 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 LCP2Q13094 533 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CAMK1Q14012 370 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 E2F5Q15329 346 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 ZSWIM9Q86XI8 627 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 PAF1Q8N7H5 531 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 STMN2Q93045 179 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CATSPER2Q96P56 530 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 SLC30A3Q99726 388 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 C17orf80Q9BSJ5 609 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 ASB8Q9H765 288 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 TNFRSF12AQ9NP84 129 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 IL26Q9NPH9 171 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 NUDT4Q9NZJ9 180 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 KLHL42Q9P2K6 505 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 GALPQ9UBC7 116 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 NKX1-2Q9UD57 310 aaPredicted RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 IKZF3Q9UKT9 509 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 KIAA0100Q14667 2235 aaKnown RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 NPEPPSL1A6NEC2 478 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CDC7O00311 574 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 BTN3A1O00481 513 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 AZIN1O14977 448 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 ANP32DO95626 131 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 TYRP14679 529 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 GKP32189 559 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CCNHP51946 323 aaPredicted RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 C1QTNF8P60827 252 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 UGT3A2Q3SY77 523 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 KANK2Q63ZY3 851 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 CRTC1Q6UUV9 634 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 FAM151BQ6UXP7 276 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 MACC1Q6ZN28 852 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 EFL1Q7Z2Z2 1120 aaKnown RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 SNX32Q86XE0 403 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms