RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 IRGQQ8WZA9 623 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 RIMBP3CA6NJZ7 1639 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 RIMBP3BA6NNM3 1639 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 RIMBP3Q9UFD9 1639 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 C1QTNF3-AMACRE9PGA6 284 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ATG13O75143 517 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 HNRNPLP14866 589 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MMP8P22894 467 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PTPN5P54829 565 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CRADDP78560 199 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MYBPC1Q00872 1141 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 FOXM1Q08050 763 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 QPCTQ16769 361 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 EARS2Q5JPH6 523 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 RNF220Q5VTB9 566 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ESRP1Q6NXG1 681 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MPP5Q8N3R9 675 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SLC4A11Q8NBS3 891 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 C9orf43Q8TAL5 461 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 UFD1Q92890 307 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 NXNL1Q96CM4 212 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 AGAP2Q99490 1192 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ANKRA2Q9H9E1 313 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SEC14L3Q9UDX4 400 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CARD8Q9Y2G2 431 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 NPEPPSL1A6NEC2 478 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 LYPLA1O75608 230 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ERP29P30040 261 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 LARS2Q15031 903 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 KCNA10Q16322 511 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ZACNQ401N2 412 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 HTATIP2Q9BUP3 242 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ULBP1Q9BZM6 244 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PCBD2Q9H0N5 130 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 KCTD5Q9NXV2 234 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 OR10H1Q9Y4A9 318 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 EML1O00423 815 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 NDUFS2O75306 463 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 USP12O75317 370 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 BDNFP23560 247 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PSEN2P49810 448 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 GK5Q6ZS86 529 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 TMEM139Q8IV31 216 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 UBR7Q8N806 425 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ALG3Q92685 438 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CRELD1Q96HD1 420 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 FCRL4Q96PJ5 515 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 GPATCH1Q9BRR8 931 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 TBCCD1Q9NVR7 557 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PSIP1O75475 530 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 LIMK2P53671 638 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MVKQ03426 396 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 RNF19BQ6ZMZ0 732 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PLCZ1Q86YW0 608 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 COLGALT2Q8IYK4 626 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SLC34A3Q8N130 599 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 FITM2Q8N6M3 262 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 C11orf24Q96F05 449 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MECRQ9BV79 373 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 KAT8Q9H7Z6 458 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CXorf21Q9HAI6 301 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MTRRQ9UBK8 725 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 AASSQ9UDR5 926 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PCDHGB1Q9Y5G3 927 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 BCL9LQ86UU0 1499 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 TFECO14948 347 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 LGALS2P05162 132 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MRPS6P82932 125 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SCRN3Q0VDG4 424 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CYP1B1Q16678 543 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 AADACL2Q6P093 401 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SLCO2A1Q92959 643 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SEMA3CQ99985 751 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 AGO1Q9UL18 857 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PCDHGC3Q9UN70 934 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 BTRCQ9Y297 605 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PLOD2O00469 737 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 B4GALT4O60513 344 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 CCNB2O95067 398 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 CLDN9O95484 217 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 IFNA16P05015 189 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 RAP2AP10114 183 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 UBA1P22314 1058 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SLC7A1P30825 629 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 CDKN2BP42772 138 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ALDH3A2P51648 485 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SIX5Q8N196 739 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 CBR4Q8N4T8 237 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 TAS2R1Q9NYW7 299 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SLC27A6Q9Y2P4 619 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 MYPNQ86TC9 1320 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 BCL9O00512 1426 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 COL5A2P05997 1499 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PLIN3O60664 434 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ENDOD1O94919 500 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 GPR1P46091 355 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AQP4P55087 323 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms