RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SQLEQ14534 574 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 CDK10Q15131 360 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 GLRX5Q86SX6 157 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 TRIB2Q92519 343 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 GTF2H4Q92759 462 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 CDCA5Q96FF9 252 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 Q96MT0 163 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 OR2B2Q9GZK3 357 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 BFARQ9NZS9 450 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 MRPL11Q9Y3B7 192 aaKnown RBP14.34□□□□□ -0.11
CDT1-201ENST00000301019 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SMIM30A4D0T7 59 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 C16orf96A6NNT2 1141 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 H0Y626 953 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZW10O43264 779 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SCO2O43819 266 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 CNTN5O94779 1100 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SNX17Q15036 470 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SKIV2LQ15477 1246 aaKnown RBP14.34□□□□□ -0.11
CDT1-201ENST00000301019 NPTX1Q15818 432 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SULF1Q8IWU6 871 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 GALNT6Q8NCL4 622 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ESAMQ96AP7 390 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 TUBA1CQ9BQE3 449 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
CDT1-201ENST00000301019 MRPL40Q9NQ50 206 aaKnown RBP14.34□□□□□ -0.11
CDT1-201ENST00000301019 CCDC154A6NI56 674 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 C2CD4BA6NLJ0 364 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 EFCAB9A8MZ26 197 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SLC1A7O00341 560 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 DIRAS1O95057 198 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 CHRNA1P02708 482 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ASPAP45381 313 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ACADSBP45954 432 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 CHRNEQ04844 493 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 CXCL9Q07325 125 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 SEMA5AQ13591 1074 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZNF267Q14586 743 aaPredicted RBP14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZMYND11Q15326 602 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 TAZQ16635 292 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 PAGE3Q5JUK9 113 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 TMEM179Q6ZVK1 233 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 AHSA2Q719I0 299 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZDHHC13Q8IUH4 622 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZNF540Q8NDQ6 660 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 ZNF555Q8NEP9 628 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 PYCR2Q96C36 320 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 LRRC58Q96CX6 371 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 GMLQ99445 158 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 VAT1Q99536 393 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 NUAK2Q9H093 628 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 VTI1BQ9UEU0 232 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 FBXO10Q9UK96 956 aa14.34□□□□□ -0.11
CDT1-201ENST00000301019 PLIN4Q96Q06 1357 aa14.33□□□□□ -0.11
CDT1-201ENST00000301019 A0A0A0MRY4 1105 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 OR6C70A6NIJ9 312 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 SNTNA6NMZ2 147 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 CENPBD1B2RD01 187 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 CABYRO75952 493 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 PRKD3O94806 890 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 TAS2R39P59534 338 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 TUBA1BP68363 451 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 PITX1P78337 314 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 MAPRE2Q15555 327 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 STXBP5Q5T5C0 1151 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 TUBA1AQ71U36 451 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 MFSD6LQ8IWD5 586 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 PARP16Q8N5Y8 322 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 BHMTQ93088 406 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 SPATA13Q96N96 652 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 RMDN3Q96TC7 470 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 TRIM15Q9C019 465 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 CRNNQ9UBG3 495 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 SLC2A6Q9UGQ3 507 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 VPS4AQ9UN37 437 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 WBP11Q9Y2W2 641 aaKnown RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 PTPRFP10586 1907 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 A0A087WZ62 844 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 NCF1BA6NI72 391 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 NCF1CA8MVU1 366 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 UBFD1O14562 309 aaKnown RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 RGS13O14921 159 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 APOA1P02647 267 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 HGFP14210 728 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 NCF1P14598 390 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 OR3A3P47888 321 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 ARCN1P48444 511 aaKnown RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 PTPN11Q06124 597 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 ZNF789Q5FWF6 425 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 RBM20Q5T481 1227 aaKnown RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 AGAP6Q5VW22 663 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 MAP1SQ66K74 1059 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 SPRED1Q7Z699 444 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 BRSK2Q8IWQ3 736 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 FAM217AQ8IXS0 508 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 LSMEM1Q8N8F7 131 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms