RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PSAPL1Q6NUJ1 521 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 LINGO4Q6UY18 593 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SIDT2Q8NBJ9 832 aaKnown RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 STAG3L4Q8TBR4 150 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 LZICQ8WZA0 190 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 PBXIP1Q96AQ6 731 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TMEM79Q9BSE2 394 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TFB2MQ9H5Q4 396 aaKnown RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SARS2Q9NP81 518 aaKnown RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CMTM6Q9NX76 183 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TAS2R13Q9NYV9 303 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SQORQ9Y6N5 450 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 PLXNA3P51805 1871 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 MKI67P46013 3256 aaKnown RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 IQCF5A8MTL0 148 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 SYN3O14994 580 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 MAGEB3O15480 346 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 TRMUO75648 421 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 PRLP01236 227 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 EPOP01588 193 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 LBPP18428 481 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ATF6P18850 670 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 HSPA13P48723 471 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ADARP55265 1226 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 MRPL58Q14197 206 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 TYSND1Q2T9J0 566 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 FUT11Q495W5 492 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 RABL3Q5HYI8 236 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 HABP4Q5JVS0 413 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ZBTB49Q6ZSB9 765 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 CHERPQ8IWX8 916 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 OR2T3Q8NH03 318 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 RHEBL1Q8TAI7 183 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 DNAJB14Q8TBM8 379 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 TOP1MTQ969P6 601 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 FUBP1Q96AE4 644 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ZNF597Q96LX8 424 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 HBEGFQ99075 208 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 MGME1Q9BQP7 344 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 GPATCH1Q9BRR8 931 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 C1orf50Q9BV19 199 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 PIF1Q9H611 641 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 CAAP1Q9H8G2 361 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 UBA2Q9UBT2 640 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 FKBPLQ9UIM3 349 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 NDUFAF1Q9Y375 327 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ARHGAP10A1A4S6 786 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 KERAO60938 352 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 BAIAP3O94812 1187 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 SLC10A3P09131 477 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 MTHFD1P11586 935 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 OGNP20774 298 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 SLC11A1P49279 550 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ATP4BP51164 291 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 NR1H2P55055 460 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 FAM189BP81408 668 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 LCP2Q13094 533 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 PCSK9Q8NBP7 692 aaKnown RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 CDK15Q96Q40 435 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 MRGBPQ9NV56 204 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 NLE1Q9NVX2 485 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-204ENST00000300862 MARCH5Q9NX47 278 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 RNF186Q9NXI6 227 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 SLAMF8Q9P0V8 285 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 SEPT3Q9UH03 358 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ZNF225Q9UK10 706 aa12.81□□□□□ -0.36
HIF3A-204ENST00000300862 ACSL4O60488 711 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 KLKB1P03952 638 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 IRF1P10914 325 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 BMP1P13497 986 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 NCK1P16333 377 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 SLC6A2P23975 617 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 OXTRP30559 389 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 CLCN2P51788 898 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 OXCT1P55809 520 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 NKX3-2P78367 333 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 PRKCQQ04759 706 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 RING1Q06587 406 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 RAD51Q06609 339 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 TBCELQ5QJ74 424 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 HACD2Q6Y1H2 254 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 SYVN1Q86TM6 617 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 NUDT8Q8WV74 236 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 ABTB1Q969K4 478 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 ROPN1LQ96C74 230 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 LRRC58Q96CX6 371 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 BIRC8Q96P09 236 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 SDR39U1Q9NRG7 319 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 USP22Q9UPT9 525 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 HEMK1Q9Y5R4 338 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 CROCCQ5TZA2 2017 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 OR6C75A6NL08 312 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms