RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SLC15A4Q8N697 577 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 TANKQ92844 425 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 SLCO4A1Q96BD0 722 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 UBXN10Q96LJ8 280 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 BPIFA1Q9NP55 256 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 SUCOQ9UBS9 1254 aaKnown RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 LAMA3Q16787 3333 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ENPP3O14638 875 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 SLC7A4O43246 635 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 HSPA13P48723 471 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TRIM32Q13049 653 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ZNF549Q6P9A3 640 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 PAQR3Q6TCH7 311 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TMEM26Q6ZUK4 368 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 CBR4Q8N4T8 237 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TRPV1Q8NER1 839 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 SEPHS2Q99611 448 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 DAPK2Q9UIK4 370 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 NDUFAF1Q9Y375 327 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 A0A0D9SEW6 157 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 KRBA1A5PL33 1030 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 MUSKO15146 869 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 KCNH1O95259 989 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 MMP2P08253 660 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 BMXP51813 675 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TAF10Q12962 218 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 PTPRRQ15256 657 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 MAPK11Q15759 364 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 CHSY3Q70JA7 882 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 LARP4Q71RC2 724 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 NAT16Q8N8M0 369 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 MYEOVQ96EZ4 313 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ACOX2Q99424 681 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 PDCD11Q14690 1871 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 SOCS2O14508 198 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 LDB2O43679 373 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 KRT75O95678 551 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 PEX11BO96011 259 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ASGR1P07306 291 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ZNF182P17025 639 aaPredicted RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 RHOQP17081 205 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 HERVK_113P63132 956 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 NEDD8Q15843 81 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 RBBP7Q16576 425 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 AARS2Q5JTZ9 985 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 FAM45BPQ6NSW5 357 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 GLB1LQ6UWU2 654 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 CYHR1Q6ZMK1 362 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TICAM1Q8IUC6 712 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 MIER2Q8N344 545 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ATP6V0D2Q8N8Y2 350 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 OR7D4Q8NG98 312 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 OR4L1Q8NH43 312 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 TBC1D15Q8TC07 691 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 FAM45AQ8TCE6 357 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 PPP1R2P1Q96PQ5 205 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ERVK-6Q9BXR3 956 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 MRM3Q9HC36 420 aaKnown RBP13.37□□□□□ -0.27
CTDP1-202ENST00000299543 CATSPERZQ9NTU4 200 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 ZNHIT2Q9UHR6 403 aa13.37□□□□□ -0.27
CTDP1-202ENST00000299543 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 ZBBXA8MT70 800 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 AQP9O43315 295 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 NDUFS3O75489 264 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 GNAO1P09471 354 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 CAPN3P20807 821 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 PBX3P40426 434 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 CDKN1CP49918 316 aaPredicted RBP13.36□□□□□ -0.27
CTDP1-202ENST00000299543 AGTR2P50052 363 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 RABL3Q5HYI8 236 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 DEPDC1Q5TB30 811 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 LGI2Q8N0V4 545 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 FBXO39Q8N4B4 442 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 TAMM41Q96BW9 452 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 POLR1EQ9GZS1 481 aaKnown RBP13.36□□□□□ -0.27
CTDP1-202ENST00000299543 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 GID8Q9NWU2 228 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 TLR6Q9Y2C9 796 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 CDC7O00311 574 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 NME4O00746 187 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 DUSP11O75319 330 aaKnown RBP13.36□□□□□ -0.27
CTDP1-202ENST00000299543 CD1DP15813 335 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 ZNF23P17027 643 aa13.36□□□□□ -0.27
CTDP1-202ENST00000299543 PRDX3P30048 256 aaKnown RBP13.36□□□□□ -0.27
CTDP1-202ENST00000299543 HMOX2P30519 316 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms