RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 GLYCTKQ8IVS8 523 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RNF25Q96BH1 459 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 DPYSL5Q9BPU6 564 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PREBQ9HCU5 417 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GPRC5BQ9NZH0 403 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 KIAA1549Q9HCM3 1950 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GLI2P10070 1586 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TIAM2Q8IVF5 1701 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 LOC102724428A0A0B4J2F2 783 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SLC33A1O00400 549 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 VILLO15195 856 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 OXSR1O95747 527 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 STAG3L2P0CL84 134 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TGFB3P10600 412 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 HLA-EP13747 358 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TNNI3P19429 210 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SOAT1P35610 550 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SIK1P57059 783 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PPP3R1P63098 170 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 FMO1Q01740 532 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 MBTD1Q05BQ5 628 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PICALMQ13492 652 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF267Q14586 743 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 C3P1Q6ZMU1 363 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 DCDC5Q6ZRR9 648 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NKAPQ8N5F7 415 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GLOD4Q9HC38 313 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 MEPEQ9NQ76 525 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SLC7A8Q9UHI5 535 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 LGALS13Q9UHV8 139 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 USP18Q9UMW8 372 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ENTPD4Q9Y227 616 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SLC27A6Q9Y2P4 619 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TMEM131Q92545 1883 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 OR6C70A6NIJ9 312 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 UGT2B17O75795 530 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ARL6IP5O75915 188 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 IL4RP24394 825 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ALDH4A1P30038 563 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GPC1P35052 558 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 WSCD2Q2TBF2 565 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RAB12Q6IQ22 244 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GTF2H5Q6ZYL4 71 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 FASTKD5Q7L8L6 764 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PNLDC1Q8NA58 520 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NPLOC4Q8TAT6 608 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 MALSU1Q96EH3 234 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NGLY1Q96IV0 654 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TBATAQ96M53 351 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GAD1Q99259 594 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TMEM45AQ9NWC5 275 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GINS2Q9Y248 185 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 LRRC10BA6NIK2 292 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 L7N2F9 121 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ARHGEF15O94989 841 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 BPGMP07738 259 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 IGFBP5P24593 272 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ATP5C1P36542 298 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GABRB2P47870 512 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CD47Q08722 323 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RNF212Q495C1 297 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PDXDC2PQ6P474 469 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RPTORQ8N122 1335 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ANGPTL6Q8NI99 470 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 S100A16Q96FQ6 103 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 C10orf90Q96M02 699 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 DBNDD2Q9BQY9 259 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TLR10Q9BXR5 811 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 COMMD4Q9H0A8 199 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 LYRM2Q9NU23 88 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CDH22Q9UJ99 828 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GRAP2O75791 330 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 F10P00742 488 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 IL3P08700 152 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 DBTP11182 482 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NCF1P14598 390 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CYP11B1P15538 503 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NDST1P52848 882 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RFTN1Q14699 578 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TTI2Q6NXR4 508 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF773Q6PK81 442 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PIGWQ7Z7B1 504 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TICAM1Q8IUC6 712 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZBTB8AQ96BR9 441 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 UNC93B1Q9H1C4 597 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 MYPNQ86TC9 1320 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TEX13CA0A0J9YWL9 993 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SCELO95171 688 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GLP2RO95838 553 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CTNNB1P35222 781 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TTPAP49638 278 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ADGRE1Q14246 886 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TOMM20Q15388 145 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PTCHD4Q6ZW05 846 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CAND1Q86VP6 1230 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PROSER2Q86WR7 435 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ETNPPLQ8TBG4 499 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms