RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 ILF3Q12906 894 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLX4-201ENST00000294008 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ASPNQ9BXN1 380 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 BATF3Q9NR55 127 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 HAO2Q9NYQ3 351 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 GMEB1Q9Y692 573 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 NPEPPSL1A6NEC2 478 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 GP5P40197 560 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 NPNTQ6UXI9 565 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 B3GAT2Q9NPZ5 323 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 HES2Q9Y543 173 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 RECQL4O94761 1208 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ZNF101Q8IZC7 436 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 NAT9Q9BTE0 207 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 POPDC2Q9HBU9 364 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 PDPK1O15530 556 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 PON1P27169 355 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 RPL3P39023 403 aaKnown RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 CAP2P40123 477 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 ANTXR2P58335 489 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 ARPC4P59998 168 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 FSTL1Q12841 308 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 DPYSQ14117 519 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 TRAPPC6BQ86SZ2 158 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 TBC1D15Q8TC07 691 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CRAMP1Q96RY5 1269 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 PRMT8Q9NR22 394 aaPredicted RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 A0A1W2PQ67 120 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 OR2AG2A6NM03 316 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 AHCYL1O43865 530 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 BRINP1O60477 761 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 KDM4BO94953 1096 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 STATHP02808 62 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CTSKP43235 329 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 RUNX2Q13950 521 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 ZNF554Q86TJ5 538 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 MB21D2Q8IYB1 491 aaPredicted RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 MINDY2Q8NBR6 621 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 KIAA1143Q96AT1 154 aaPredicted RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 HIPK3Q9H422 1215 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 GTF3C4Q9UKN8 822 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CLCA3PQ9Y6N3 262 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 USP6P35125 1406 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 PPEF2O14830 753 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 SERPINE1P05121 402 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 NR2F6P10588 404 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 ICAM3P32942 547 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 XIAPP98170 497 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 TXNDC11Q6PKC3 985 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 AVL9Q8NBF6 648 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 OR4K17Q8NGC6 315 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 MALT1Q9UDY8 824 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 OR12D3Q9UGF7 316 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 SLC37A4O43826 429 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 TRBC1P01850 177 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 SYN1P17600 705 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 MLC1Q15049 377 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 NLGN4XQ8N0W4 816 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CLPTM1LQ96KA5 538 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 CCDC59Q9P031 241 aaKnown RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 PROCP04070 461 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 LYPLAL1Q5VWZ2 237 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 EIF1ADQ8N9N8 165 aaKnown RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 HINT2Q9BX68 163 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 ISCUQ9H1K1 167 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 TSPOAP1O95153 1857 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 DPPA5A6NC42 116 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 RAB4AP20338 218 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 TROAPQ12815 778 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 NECTIN1Q15223 517 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 IQCHQ86VS3 1027 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CNPY4Q8N129 248 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
SLX4-201ENST00000294008 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 BPIFA3Q9BQP9 254 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 TBC1D17Q9HA65 648 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CTPS2Q9NRF8 586 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
SLX4-201ENST00000294008 CCRL2O00421 344 aa12.36□□□□□ -0.43
SLX4-201ENST00000294008 SHOXO15266 292 aa12.36□□□□□ -0.43
SLX4-201ENST00000294008 TKTP29401 623 aaKnown RBP12.36□□□□□ -0.43
SLX4-201ENST00000294008 SSTR1P30872 391 aa12.36□□□□□ -0.43
SLX4-201ENST00000294008 CD52P31358 61 aa12.36□□□□□ -0.43
SLX4-201ENST00000294008 TTPAP49638 278 aa12.36□□□□□ -0.43
SLX4-201ENST00000294008 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
SLX4-201ENST00000294008 CREB5Q02930 508 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms