RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 IL2P60568 153 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 DUSP4Q13115 394 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 FAM187BQ17R55 369 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 METTL21CQ5VZV1 264 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CLYBLQ8N0X4 340 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SIPA1Q96FS4 1042 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 WDR37Q9Y2I8 494 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 MTF2Q9Y483 593 aaPredicted RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SQORQ9Y6N5 450 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CCRL2O00421 344 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 NTRK1P04629 796 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 HLA-DQB2P05538 268 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 LINGO3P0C6S8 592 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 IL4RP24394 825 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 EDNRBP24530 442 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CSNK2BP67870 215 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 TUSC3Q13454 348 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 IL18R1Q13478 541 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 BOP1Q14137 746 aaKnown RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 STXBP5Q5T5C0 1151 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 MZT2BQ6NZ67 158 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 LINGO4Q6UY18 593 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 IZUMO1Q8IYV9 350 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 UBE2J2Q8N2K1 259 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SCAIQ8N9R8 606 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 OR56A4Q8NGH8 313 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 BRI3BPQ8WY22 251 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PPM1MQ96MI6 270 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 NPY6RQ99463 290 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 ELOVL6Q9H5J4 265 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 REEP1Q9H902 201 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CRTAC1Q9NQ79 661 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 OXSMQ9NWU1 459 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 LSM7Q9UK45 103 aaKnown RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 GNG14A0A1W2PPG7 69 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 HAT1O14929 419 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 TSPAN19P0C672 248 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 EPB42P16452 691 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PBX3P40426 434 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SLC26A3P40879 764 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 ETV4P43268 484 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 EPS8Q12929 822 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PYDC2Q56P42 97 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 GPRIN1Q7Z2K8 1008 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PIM3Q86V86 326 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PGAM4Q8N0Y7 254 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 GANCQ8TET4 914 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PLK2Q9NYY3 685 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 RAB26Q9ULW5 256 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 KCTD3Q9Y597 815 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PCDHGC4Q9Y5F7 938 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SERPINA1P01009 418 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CST1P01037 141 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 ANXA6P08133 673 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 NCK1P16333 377 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 WARSP23381 471 aaKnown RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PBLDP30039 288 aaPredicted RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 GRIK3Q13003 919 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 FGD3Q5JSP0 725 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 KLHDC10Q6PID8 442 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CASP12Q6UXS9 341 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 ZNF621Q6ZSS3 439 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 TPGS1Q6ZTW0 290 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 CACTIN-AS1Q8N1I8 211 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 LRRC17Q8N6Y2 441 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 OR8H1Q8NGG4 311 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 OR4L1Q8NH43 312 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
SLC6A1-201ENST00000287766 SLX4Q8IY92 1834 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 TBX1O43435 398 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ZBTB14O43829 449 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 GUCY1B2O75343 617 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PSIP1O75475 530 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 CNPP09543 421 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 UGT1A6P19224 532 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 UGT1A1P22309 533 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 UGT1A4P22310 534 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 CES1P23141 567 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 UGT1A3P35503 534 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 UGT1A5P35504 534 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 HALP42357 657 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 SLC10A7Q0GE19 358 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 TSNQ15631 228 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 SYTL3Q4VX76 610 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 UGT3A1Q6NUS8 523 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PRR23CQ6ZRP0 262 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 RTL3Q8N8U3 475 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 KBTBD8Q8NFY9 601 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 CLHC1Q8NHS4 586 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 TMEM40Q8WWA1 233 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PAAF1Q9BRP4 392 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms