RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 MMP3P08254 477 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 MAPK14Q16539 360 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 OR4K2Q8NGD2 314 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 DCLRE1BQ9H816 532 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 TBX1O43435 398 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 SNAPC1Q16533 368 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 MPP5Q8N3R9 675 aa20.24■□□□□ 0.83
CACNA1B-201ENST00000277549 ZNF16P17020 682 aaPredicted RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 PLA2G16P53816 162 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 GPR65Q8IYL9 337 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 ASB2Q96Q27 587 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 DDX20Q9UHI6 824 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 SSR3Q9UNL2 185 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 PLAGL2Q9UPG8 496 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CDK16Q00536 496 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 UGCGQ16739 394 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 ATXN7L2Q5T6C5 722 aaPredicted RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 ANXA8L1Q5VT79 327 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CHRDL2Q6WN34 429 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 RAI2Q9Y5P3 530 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 APOC4-APOC2K7ER74 178 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 APOC2P02655 101 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CDKN1CP49918 316 aaPredicted RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 PTENP60484 403 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 TXNL4AP83876 142 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 TOR1AIP1Q5JTV8 583 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CYB5D2Q8WUJ1 264 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 C12orf66Q96MD2 445 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 AP2A2O94973 939 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 C4orf46Q504U0 113 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 DACT2Q5SW24 774 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 ZPBP2Q6X784 338 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 ALYREFQ86V81 257 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 TESCQ96BS2 214 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 C1GALT1C1Q96EU7 318 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 LEF1Q9UJU2 399 aaPredicted RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CYB5AP00167 134 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 TKTP29401 623 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CASP5P51878 434 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CDK18Q07002 472 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 HBS1LQ9Y450 684 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 TIMM22Q9Y584 194 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CCDC162PA2VCL2 907 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 PGRMC2O15173 223 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 TULP3O75386 442 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 ERBB2P04626 1255 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 GDI1P31150 447 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 PSEN1P49768 467 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CLCNKBP51801 687 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 APOBEC3HQ6NTF7 200 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 PRDM12Q9H4Q4 367 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 MRPS17Q9Y2R5 130 aaKnown RBP20.23■□□□□ 0.83
CACNA1B-201ENST00000277549 G3V2T6 193 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 CLCN5P51795 746 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 CAP1Q01518 475 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 SULT2A1Q06520 285 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 OR7A2PQ8NGA2 310 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 TGFBR2P37173 567 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 MAPK8P45983 427 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 MAN2A2P49641 1150 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 OAZ1P54368 228 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 ZCCHC12Q6PEW1 402 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 COX4I2Q96KJ9 171 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 BATF3Q9NR55 127 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 SCGB1D2O95969 90 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 SLC26A3P40879 764 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 MRPS5P82675 430 aaKnown RBP20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 CNPY4Q8N129 248 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 RGSL1A5PLK6 1076 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 FAM227AF5H4B4 570 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 CLCN7P51798 805 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 RRP1BQ14684 758 aaKnown RBP20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 MSANTD1Q6ZTZ1 278 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 ADGRE2Q9UHX3 823 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 SHBGP04278 402 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 INHAP05111 366 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 GK5Q6ZS86 529 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 TRMT61BQ9BVS5 477 aaKnown RBP20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 TRIM2Q9C040 744 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 RNF144AP50876 292 aaPredicted RBP20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 HBEGFQ99075 208 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 VAT1Q99536 393 aa20.22■□□□□ 0.83
CACNA1B-201ENST00000277549 CLEC3AO75596 197 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 PGAM2P15259 253 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 PTNP21246 168 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 TRAP1Q12931 704 aaKnown RBP20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 TMEM220Q6QAJ8 160 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 SLC34A1Q06495 639 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 RIPK1Q13546 671 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 LARS2Q15031 903 aaKnown RBP20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 OR5B17Q8NGF7 314 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 IRAK3Q9Y616 596 aa20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 CLTCQ00610 1675 aaKnown RBP20.21■□□□□ 0.83
CACNA1B-201ENST00000277549 ACTR3P61158 418 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms