RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 GLMNQ92990 594 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 INTS10Q9NVR2 710 aaKnown RBP12.84□□□□□ -0.35
COL8A1-202ENST00000273342 FAM32AQ9Y421 112 aaKnown RBP12.84□□□□□ -0.35
COL8A1-202ENST00000273342 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 RBM47A0AV96 593 aaKnown RBP12.83□□□□□ -0.35
COL8A1-202ENST00000273342 TRIM64A6NGJ6 449 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 CLDN25C9JDP6 229 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 AQP9O43315 295 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 SEC14L2O76054 403 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 ALDH2P05091 517 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 THRBP10828 461 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 TMBIM6P55061 237 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 VBP1P61758 197 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 KIAA0930Q6ICG6 404 aaPredicted RBP12.83□□□□□ -0.35
COL8A1-202ENST00000273342 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 SPESP1Q6UW49 350 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 RANBP10Q6VN20 620 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 BNIPLQ7Z465 357 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 RAB2BQ8WUD1 216 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 HTRA1Q92743 480 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 C16orf70Q9BSU1 422 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 SIAEQ9HAT2 523 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 ATAD3AQ9NVI7 634 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 RBPJLQ9UBG7 517 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 KLQ9UEF7 1012 aa12.83□□□□□ -0.35
COL8A1-202ENST00000273342 NRCAMQ92823 1304 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 A6NL46 340 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 BBIP1A8MTZ0 92 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 J3KR12 359 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CNMDO75829 334 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CD4P01730 458 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CRHBPP24387 322 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 TPTEP56180 551 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 SV2CQ496J9 727 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 C8orf59Q8N0T1 100 aaPredicted RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 LINC01465Q8N7H1 131 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 NDNFQ8TB73 568 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 DNAJB3Q8WWF6 145 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ALOXE3Q9BYJ1 711 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ENTPD7Q9NQZ7 604 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 SDR39U1Q9NRG7 319 aaPredicted RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 MTRRQ9UBK8 725 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ABCB7O75027 752 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 PAGE1O75459 146 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CYBBP04839 570 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 HTR1AP08908 422 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 FCGR1AP12314 374 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CYP4B1P13584 511 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CLCN5P51795 746 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 SLC13A2Q13183 592 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 DPY19L1Q2PZI1 675 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CTU2Q2VPK5 515 aaKnown RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 IQSEC1Q6DN90 963 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 PRMT9Q6P2P2 845 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ENPP6Q6UWR7 440 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 RAB44Q7Z6P3 723 aaPredicted RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 RBM23Q86U06 439 aaKnown RBP12.83□□□□□ -0.36
COL8A1-202ENST00000273342 PHYKPLQ8IUZ5 450 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 DTWD1Q8N5C7 304 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 FNDC5Q8NAU1 212 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 CNIH3Q8TBE1 160 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 FRS2Q8WU20 508 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 TSPAN17Q96FV3 270 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 SLC9A7Q96T83 725 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 ARL5AQ9Y689 179 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 SLC30A1Q9Y6M5 507 aa12.83□□□□□ -0.36
COL8A1-202ENST00000273342 A0A1W2PP18 115 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 HS6ST1O60243 411 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 GMNNO75496 209 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 CAPN15O75808 1086 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 NADKO95544 446 aaPredicted RBP12.82□□□□□ -0.36
COL8A1-202ENST00000273342 CPNE6O95741 557 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 S1PR4O95977 384 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 IL12AP29459 219 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 ADRA1AP35348 466 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 MAP2K4P45985 399 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 SERPINH1P50454 418 aaKnown RBP12.82□□□□□ -0.36
COL8A1-202ENST00000273342 SLC10A7Q0GE19 358 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 IHHQ14623 411 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 INAQ16352 499 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 USP51Q70EK9 711 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 GALNT5Q7Z7M9 940 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 CDYL2Q8N8U2 506 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL8A1-202ENST00000273342 FCRL2Q96LA5 508 aaPredicted RBP12.82□□□□□ -0.36
COL8A1-202ENST00000273342 CARS2Q9HA77 564 aaKnown RBP12.82□□□□□ -0.36
COL8A1-202ENST00000273342 SUN2Q9UH99 717 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 TTC3P53804 2025 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 AGRPO00253 132 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms