RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 GDI1P31150 447 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 SKIV2L2P42285 1042 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 HK2P52789 917 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PRKCQQ04759 706 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 OVGP1Q12889 678 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 NFATC2Q13469 925 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ZCCHC23Q6ZST2 131 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PHTF2Q8N3S3 785 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PNPLA1Q8N8W4 532 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 RHEBL1Q8TAI7 183 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PIWIL2Q8TC59 973 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 SHDQ96IW2 340 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ZFYVE19Q96K21 471 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 RMDN2Q96LZ7 410 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 KLHL32Q96NJ5 620 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 P2RY12Q9H244 342 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ACTR5Q9H9F9 607 aaPredicted RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 IL26Q9NPH9 171 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 NFKBIL1Q9UBC1 381 aaPredicted RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 MED16Q9Y2X0 877 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 F8W8V4 182 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 H3BMM5 538 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ARNTLO00327 626 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 PI15O43692 258 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 BNIP3LO60238 219 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 VPS26AO75436 327 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 RHOBTB1O94844 696 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ZNF7P17097 686 aaPredicted RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 GLRBP48167 497 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ARFIP2P53365 341 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ATP6V0D1P61421 351 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 NFKB2Q00653 900 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 RUNX3Q13761 415 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 GALNTL6Q49A17 601 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ZNF805Q5CZA5 627 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 LRRC66Q68CR7 880 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 UGT3A1Q6NUS8 523 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 TMEM207Q6UWW9 146 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PIWIL4Q7Z3Z4 852 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 SLC22A9Q8IVM8 553 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 WDR75Q8IWA0 830 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 YAF2Q8IY57 180 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 RBFAQ8N0V3 343 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 NKAPQ8N5F7 415 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 TERB1Q8NA31 727 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 STON2Q8WXE9 905 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 C20orf27Q9GZN8 174 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 DERL2Q9GZP9 239 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 CDH19Q9H159 772 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 KCNK13Q9HB14 408 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 TRPV5Q9NQA5 729 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 HEBP1Q9NRV9 189 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 RAD18Q9NS91 495 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ABCF3Q9NUQ8 709 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 CPSF2Q9P2I0 782 aaKnown RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 HAO1Q9UJM8 370 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 EDDM13A0A1B0GTR0 161 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 RGSL1A5PLK6 1076 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 OTOL1A6NHN0 477 aaPredicted RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 UPK3BL1B0FP48 263 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 UPK3BL2E5RIL1 263 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 STK25O00506 426 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 DLX3O60479 287 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 NPHS1O60500 1241 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 LEFTY1O75610 366 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 PRNPP04156 253 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 CD1DP15813 335 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 ALOX15P16050 662 aaPredicted RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 FMO4P31512 558 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 VIPR1P32241 457 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 CDKN1CP49918 316 aaPredicted RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 NUBP1P53384 320 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 DCDC1P59894 354 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 E2F5Q15329 346 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 HNRNPA1L2Q32P51 320 aaKnown RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 RFWD2Q8NHY2 731 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 UCMAQ8WVF2 138 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 ANKRD49Q8WVL7 239 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 SORCS1Q8WY21 1168 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 SORT1Q99523 831 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 PRRX2Q99811 253 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 GATA5Q9BWX5 397 aaPredicted RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 DRC3Q9H069 523 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 TFB2MQ9H5Q4 396 aaKnown RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 B4GALT6Q9UBX8 382 aa15.24■□□□□ 0.03
COPS3-201ENST00000268717 RRP15Q9Y3B9 282 aaKnown RBP15.24■□□□□ 0.03
COPS3-201ENST00000268717 A0A0U1RQS6 177 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 PRRT4C9JH25 899 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 DNAJC6O75061 913 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 LHCGRP22888 699 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 ACRV1P26436 265 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 SLC6A11P48066 632 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 PGGT1BP53609 377 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 CORO7P57737 925 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 PTSQ03393 145 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 CTSL3PQ5NE16 218 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 FAM151BQ6UXP7 276 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms