RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 POLR2JP52435 117 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 MTPNP58546 118 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ARHGAP1Q07960 439 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TRAP1Q12931 704 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PHKG1Q16816 387 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 MON1AQ86VX9 555 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PLD6Q8N2A8 252 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 BTN2A2Q8WVV5 523 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CHCHD6Q9BRQ6 235 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 HAPLN2Q9GZV7 340 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 OXSMQ9NWU1 459 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PLK2Q9NYY3 685 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 DKK3Q9UBP4 350 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TCAF1Q9Y4C2 921 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 FAM220BPB1ANY3 271 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 MLYCDO95822 493 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 GPIP06744 558 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 FGF3P11487 239 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 COX7A2P14406 83 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 ATP5C1P36542 298 aaKnown RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 DNASE1L3Q13609 305 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 IKBKEQ14164 716 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 NCCRP1Q6ZVX7 275 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 OR4L1Q8NH43 312 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 TSSK3Q96PN8 268 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 TM6SF2Q9BZW4 377 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 TXNRD2Q9NNW7 524 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 EXD2Q9NVH0 621 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 ATP6V1HQ9UI12 483 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF221Q9UK13 617 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 FBXW11Q9UKB1 542 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 MYH14Q7Z406 1995 aaKnown RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 E7ESA3 106 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 NDUFS2O75306 463 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 RNASEH2AO75792 299 aaKnown RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 TSPAN19P0C672 248 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 PBLDP30039 288 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 GLUD2P49448 558 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 PPP1R14BQ96C90 147 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 MED8Q96G25 268 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 VPS35Q96QK1 796 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 HIPK3Q9H422 1215 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 ARL15Q9NXU5 204 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF624Q9P2J8 865 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 CNTN6Q9UQ52 1028 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 A0A1W2PQH9 124 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 PGLSO95336 258 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 IGFBP5P24593 272 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 CCNCP24863 283 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 RHDQ02161 417 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 DSC2Q02487 901 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 TUSC3Q13454 348 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 EPGNQ6UW88 154 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 HFE2Q6ZVN8 426 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 PROSER1Q86XN7 944 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 CLEC4MQ9H2X3 399 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-201ENST00000267199 USP29Q9HBJ7 922 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 TRPC4Q9UBN4 977 aa11.49□□□□□ -0.57
VPS33A-201ENST00000267199 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 RGS10O43665 173 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 FGF1P05230 155 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 CRATP43155 626 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ALDH9A1P49189 494 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 PRKCQQ04759 706 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ACSM2AQ08AH3 577 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 MYBPC3Q14896 1274 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ARMC12Q5T9G4 340 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ACSM2BQ68CK6 577 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 CRYBG2Q8N1P7 616 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 CFAP52Q8N1V2 620 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 PNPT1Q8TCS8 783 aaKnown RBP11.48□□□□□ -0.57
VPS33A-201ENST00000267199 TOR3AQ9H497 397 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 A0A0G2JLL6 359 aaPredicted RBP11.48□□□□□ -0.57
VPS33A-201ENST00000267199 UBXN8O00124 270 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 CXCR3P49682 368 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 SYT16Q17RD7 645 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF829Q3KNS6 432 aaPredicted RBP11.48□□□□□ -0.57
VPS33A-201ENST00000267199 RAB6CQ53S08 254 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 CLEC20AQ6ZU45 233 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 PRRT2Q7Z6L0 340 aaPredicted RBP11.48□□□□□ -0.57
VPS33A-201ENST00000267199 LEMD2Q8NC56 503 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ASZ1Q8WWH4 475 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 ISOC1Q96CN7 298 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 MLPHQ9BV36 600 aaPredicted RBP11.48□□□□□ -0.57
VPS33A-201ENST00000267199 TRIM8Q9BZR9 551 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 RAB6CQ9H0N0 254 aa11.48□□□□□ -0.57
VPS33A-201ENST00000267199 KLHL1Q9NR64 748 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms