RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ARMCX4Q5H9R4 360 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 TMEM79Q9BSE2 394 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF490Q9ULM2 529 aaPredicted RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 ADAMTS13Q76LX8 1427 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 NOL4O94818 638 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 AMIGO1Q86WK6 493 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 GDPD5Q8WTR4 605 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 RBCK1Q9BYM8 510 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PPCSQ9HAB8 311 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 TMEM98Q9Y2Y6 226 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 ECDO95905 644 aaPredicted RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 FAM153BP0C7A2 387 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 CLCN7P51798 805 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PTPN5P54829 565 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 FAM153CQ494X1 144 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PMF1Q6P1K2 205 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PCDHA2Q9Y5H9 948 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 TMEM150CB9EJG8 249 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PSMD10O75832 226 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 POP4O95707 220 aaKnown RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 ADARP55265 1226 aaKnown RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 ZBTB2Q8N680 514 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 BOLLQ8N9W6 283 aaKnown RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 NLGN4YQ8NFZ3 816 aaPredicted RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 TEX47Q8TBZ9 253 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 MAGEB18Q96M61 343 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 H3BSH0 61 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 MEIS2O14770 477 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 MRASO14807 208 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 ASNA1O43681 348 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 B4GALT2O60909 372 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PKNOX1P55347 436 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 PHF10Q8WUB8 498 aaKnown RBP15.76■□□□□ 0.11
SHANK3-201ENST00000262795 FAM83DQ9H4H8 585 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 RASSF1Q9NS23 344 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 SEMA3GQ9NS98 782 aa15.76■□□□□ 0.11
SHANK3-201ENST00000262795 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 TNFRSF10BO14763 440 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 AREL1O15033 823 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 CSTF1Q05048 431 aaKnown RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 YIPF4Q9BSR8 244 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 LOC100506127A0A0U1RQW1 187 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 LRPAP1P30533 357 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 IL12RB1P42701 662 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 EIF1AXP47813 144 aaKnown RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 CDKN1CP49918 316 aaPredicted RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ECH1Q13011 328 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 KRR1Q13601 381 aaKnown RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 LSM12Q3MHD2 195 aaKnown RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 TRIM40Q6P9F5 258 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF730Q6ZMV8 503 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 NPLOC4Q8TAT6 608 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ERGIC2Q96RQ1 377 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 MCUBQ9NWR8 336 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 PRAMEF1O95521 474 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 RCVRNP35243 200 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ZBTB49Q6ZSB9 765 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 DGAT2Q96PD7 388 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 FCRL4Q96PJ5 515 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SGIP1Q9BQI5 828 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 MARCH7Q9H992 704 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 PLCL2Q9UPR0 1127 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 CAPN6Q9Y6Q1 641 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SIGLEC16A6NMB1 481 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 KPNA4O00629 521 aaPredicted RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 PCDHGA12O60330 932 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 MTX2O75431 263 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 OTX2P32243 289 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SLC6A9P48067 706 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 NDUFA5Q16718 116 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 GPRIN3Q6ZVF9 776 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 TREML1Q86YW5 311 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 OFCC1Q8IZS5 231 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 CELF5Q8N6W0 485 aaKnown RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 TBATAQ96M53 351 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 TMEM138Q9NPI0 162 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 CCDC177Q9NQR7 707 aaPredicted RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF446Q9NWS9 450 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 COL1A2P08123 1366 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 MMP20O60882 483 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 HOXA10P31260 410 aaPredicted RBP15.75■□□□□ 0.11
SHANK3-201ENST00000262795 OR4E2Q8NGC2 313 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 TOP1MTQ969P6 601 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 METTL7AQ9H8H3 244 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 A0A0A0MRY4 1105 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 A0A0U1RQJ8 604 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SOWAHBA6NEL2 793 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 EFCAB10A6NFE3 127 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 IL6P05231 212 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ALOX5P09917 674 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 C1orf61Q13536 156 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ALG1LQ6GMV1 187 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SLC4A11Q8NBS3 891 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SCAMP5Q8TAC9 235 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 BRSK1Q8TDC3 778 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SPATA13Q96N96 652 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 SLC38A2Q96QD8 506 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 MOCS1Q9NZB8 636 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 ARMCX1Q9P291 453 aa15.75■□□□□ 0.11
SHANK3-201ENST00000262795 UBXN7O94888 489 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms