RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CD1DP15813 335 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ALDH3B2P48448 385 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 EMP3P54852 163 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 TBX4P57082 545 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 CLCQ05315 142 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 SEMA3AQ14563 771 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 POLD3Q15054 466 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 UGT3A2Q3SY77 523 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 MRNIPQ6NTE8 343 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 CDYL2Q8N8U2 506 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 TRMOQ9BU70 441 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 C9orf16Q9BUW7 83 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ING2Q9H160 280 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ALG2Q9H553 416 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 GALPQ9UBC7 116 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 BTN3A1O00481 513 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC7A4O43246 635 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 ATE1O95260 518 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 CTBSQ01459 385 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 MGAT3Q09327 533 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 FGD3Q5JSP0 725 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 PAF1Q8N7H5 531 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 ANKFN1Q8N957 763 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 IRGQQ8WZA9 623 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 ROPN1LQ96C74 230 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 CENPNQ96H22 339 aaPredicted RBP14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 HOPXQ9BPY8 73 aaPredicted RBP14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 CSNK1G1Q9HCP0 422 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 INTS7Q9NVH2 962 aaKnown RBP14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 SUN2Q9UH99 717 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 PADI4Q9UM07 663 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 NFKBIAP25963 317 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 CST5P28325 142 aaPredicted RBP14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 OR1E1P30953 314 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 HOXC8P31273 242 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 ACADVLP49748 655 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 NUP107P57740 925 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 BNIP3Q12983 259 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 LRRC26Q2I0M4 334 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 BORAQ6PGQ7 559 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 EFHBQ8N7U6 833 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 GIPC3Q8TF64 312 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 SARDHQ9UL12 918 aa14.38□□□□□ -0.11
SFSWAP-201ENST00000261674 FXYD1O00168 92 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 KATNA1O75449 491 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 NAA20P61599 178 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 TRAF2Q12933 501 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 TRIM71Q2Q1W2 868 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ANKS6Q68DC2 871 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 UGT3A1Q6NUS8 523 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 DUS1LQ6P1R4 473 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC39A5Q6ZMH5 540 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 CLEC4FQ8N1N0 589 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 LRRC43Q8N309 656 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 FNDC5Q8NAU1 212 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 LINC01599Q8WXQ3 324 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 IGSF8Q969P0 613 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 BPIFA1Q9NP55 256 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 SCN10AQ9Y5Y9 1956 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 CCDC154A6NI56 674 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 LDB2O43679 373 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 NDUFS3O75489 264 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 CSF2RAP15509 400 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 DNAJB1P25685 340 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 GGT5P36269 586 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 CDKN1CP49918 316 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ZNF33AQ06730 810 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 KCTD8Q6ZWB6 473 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ADGRG5Q8IZF4 528 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 TRPV3Q8NET8 790 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 HGH1Q9BTY7 390 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ZYG11BQ9C0D3 744 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 MFSD1Q9H3U5 465 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 MRGBPQ9NV56 204 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 SQORQ9Y6N5 450 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 NPEPPSL1A6NEC2 478 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 GOLGA8CPA6NN73 597 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 DLGAP1O14490 977 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 RAMP2O60895 175 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 LDLRP01130 860 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 MTHFD2P13995 350 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ZNF37AP17032 561 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 PSMD8P48556 350 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 GPNMBQ14956 572 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 PTPRRQ15256 657 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 C10orf120Q5SQS8 335 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 SPOUT1Q5T280 376 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 DNAJC14Q6Y2X3 702 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 STK32CQ86UX6 486 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ABI1Q8IZP0 508 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ATAD1Q8NBU5 361 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 BPIFB6Q8NFQ5 453 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms