RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 OCM2P0CE71 109 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 OCMP0CE72 109 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 GNA12Q03113 381 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 TWF1Q12792 350 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 UPP1Q16831 310 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 TAF2Q6P1X5 1199 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 BHLHA9Q7RTU4 235 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 SCD5Q86SK9 330 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 EPHX4Q8IUS5 362 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 SKA2Q8WVK7 121 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 LEF1Q9UJU2 399 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 KANSL1LA0AUZ9 987 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 GPR182O15218 404 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 S100BP04271 92 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 LSM3P62310 102 aaKnown RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 FBXL22Q6P050 247 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 MILR1Q7Z6M3 343 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 DCP1BQ8IZD4 617 aaKnown RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 OSCP1Q8WVF1 389 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 TEX37Q96LM6 180 aa16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-202ENST00000261368 NOBOXO60393 691 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 NIPSNAP2O75323 286 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 VPS26AO75436 327 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 RSL1D1O76021 490 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 UGT1A1P22309 533 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 UGT1A4P22310 534 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 DNAJB1P25685 340 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 UGT1A3P35503 534 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 UGT1A5P35504 534 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 TUBA4AP68366 448 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 PIGFQ07326 219 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 GPSM1Q86YR5 675 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 LGI2Q8N0V4 545 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SIDT2Q8NBJ9 832 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 RTP3Q9BQQ7 232 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SMOC2Q9H3U7 446 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 EXD2Q9NVH0 621 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 HACD3Q9P035 362 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 PADI3Q9ULW8 664 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SNX5Q9Y5X3 404 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 CBX4O00257 560 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 RPP40O75818 363 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SLC2A4P14672 509 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 RPL9P32969 192 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 IST1P53990 364 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 LAPTM5Q13571 262 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 XKR4Q5GH76 650 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 ZNF549Q6P9A3 640 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 BORAQ6PGQ7 559 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 ADGRG5Q8IZF4 528 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 OR7D4Q8NG98 312 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 CDC26Q8NHZ8 85 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 IGSF8Q969P0 613 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 FAM162AQ96A26 154 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 MUS81Q96NY9 551 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 ASB2Q96Q27 587 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 CINPQ9BW66 212 aaPredicted RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 MRM3Q9HC36 420 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 ZFP14Q9HCL3 533 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SNAP91O60641 907 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 ALDH3B2P48448 385 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 ZNF33AQ06730 810 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 GRB14Q14449 540 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SEMA3AQ14563 771 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SPESP1Q6UW49 350 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 RSPH1Q8WYR4 309 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 BIRC7Q96CA5 298 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 LINGO1Q96FE5 620 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 TUBB1Q9H4B7 451 aa16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 AFF4Q9UHB7 1163 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-202ENST00000261368 SYCE1LA8MT33 242 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 IQCF5A8MTL0 148 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 STX7O15400 261 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 DEAF1O75398 565 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 CNPP09543 421 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 IL7RP16871 459 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 CDKN1CP49918 316 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 OR4D2P58180 307 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 TNK2Q07912 1038 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 CCDC81Q6ZN84 652 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 GPR180Q86V85 440 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 TBC1D21Q8IYX1 336 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 OR10Q1Q8NGQ4 319 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 FNDC8Q8TC99 324 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 BMP10O95393 424 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 C1RP00736 705 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 GPIP06744 558 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 RHOQP17081 205 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 PRKG2Q13237 762 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 MS4A13Q5J8X5 152 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 GPRIN3Q6ZVF9 776 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 OR56A4Q8NGH8 313 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 ZBTB18Q99592 522 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 HIPK3Q9H422 1215 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 ARMC1Q9NVT9 282 aa16.06■□□□□ 0.16
SNCAIP-202ENST00000261368 GIT1Q9Y2X7 761 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms