RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 ZNF789Q5FWF6 425 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 GPRC6AQ5T6X5 926 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 ADAMTSL4Q6UY14 1074 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 TRIM74Q86UV6 250 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 LMNTD2Q8IXW0 634 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 CYTH2Q99418 400 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 LGR4Q9BXB1 951 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 FBXO5Q9UKT4 447 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 PCDHGA2Q9Y5H1 932 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 PLXNB3Q9ULL4 1909 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 THADAQ6YHU6 1953 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 MTX2O75431 263 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 PYGLP06737 847 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 OGNP20774 298 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 MPP1Q00013 466 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 CDK3Q00526 305 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 KHDC1Q4VXA5 237 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 ZNF648Q5T619 568 aaPredicted RBP15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 CTAGE3PQ8IX95 158 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 PPM1NQ8N819 430 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 C2CD4AQ8NCU7 369 aaPredicted RBP15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 DDHD1Q8NEL9 900 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 DNASE2BQ8WZ79 361 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 CDKL2Q92772 493 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 FUBP1Q96AE4 644 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 ULK4Q96C45 1275 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 COX14Q96I36 57 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 SLC6A18Q96N87 628 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 BOCQ9BWV1 1114 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 TEX101Q9BY14 249 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 WDR26Q9H7D7 661 aa15.67■□□□□ 0.1
CCDC90B-201ENST00000260054 CEP192Q8TEP8 1941 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 SDK1Q7Z5N4 2213 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 VPS13AQ96RL7 3174 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 SLC25A14O95258 325 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 S1PR4O95977 384 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 GABRB3P28472 473 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 PMLP29590 882 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 DHPSP49366 369 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 PFN3P60673 137 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 AARS2Q5JTZ9 985 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 CERS6Q6ZMG9 384 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 CEP68Q76N32 757 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 MARK2Q7KZI7 788 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 ABI3BPQ7Z7G0 1075 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 SDCCAG8Q86SQ7 713 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 PHYKPLQ8IUZ5 450 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 OR2W6PQ8NHA6 318 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 C1orf216Q8TAB5 229 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 GDAP1Q8TB36 358 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 HIC2Q96JB3 615 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 ZC3H10Q96K80 434 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 APOOQ9BUR5 198 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 MIR1-1HGQ9H1L0 117 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 FBXO6Q9NRD1 293 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 VPS18Q9P253 973 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 HS3ST3A1Q9Y663 406 aa15.66■□□□□ 0.1
CCDC90B-201ENST00000260054 IGLV3-16A0A075B6K0 115 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 OR1I1O60431 355 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 NUDT17P0C025 328 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 ITPKAP23677 461 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 TTPAP49638 278 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 B4GALNT1Q00973 533 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 STAT4Q14765 748 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 KLHL38Q2WGJ6 581 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 LYSMD4Q5XG99 296 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 KYAT3Q6YP21 454 aaKnown RBP15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 KIAA0408Q6ZU52 694 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 SLC26A11Q86WA9 606 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 LRRC6Q86X45 466 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 RGL4Q8IZJ4 473 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 GABPB2Q8TAK5 448 aaPredicted RBP15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 NAT14Q8WUY8 206 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 MRRFQ96E11 262 aaKnown RBP15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 TCF12Q99081 682 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 COPS8Q99627 209 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 ZDHHC3Q9NYG2 299 aa15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 OAS3Q9Y6K5 1087 aaKnown RBP15.65■□□□□ 0.1
CCDC90B-201ENST00000260054 EXOC1LA0A1B0GW35 172 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 A6NNZ2 444 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 FAM155BO75949 473 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 HAUS5O94927 633 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 AHSGP02765 367 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 MYCLP1P12525 358 aaPredicted RBP15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 GCAP28676 217 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 ABCG1P45844 678 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 LEPRP48357 1165 aaKnown RBP15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 WDR45BQ5MNZ6 344 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 LDLRAP1Q5SW96 308 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 TPRG1LQ5T0D9 272 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 LYPLAL1Q5VWZ2 237 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 CNSTQ6PJW8 725 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 STRA8Q7Z7C7 330 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 OR13H1Q8NG92 308 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 SCG3Q8WXD2 468 aaKnown RBP15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 ANKRD7Q92527 254 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 LPGAT1Q92604 370 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 PAFAH2Q99487 392 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms