RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ZDHHC6Q9H6R6 413 aa27.48■■□□□ 1.99
CCM2-201ENST00000258781 TRPV4Q9HBA0 871 aa27.48■■□□□ 1.99
CCM2-201ENST00000258781 TRMT6Q9UJA5 497 aaKnown RBP27.48■■□□□ 1.99
CCM2-201ENST00000258781 FBXO10Q9UK96 956 aa27.48■■□□□ 1.99
CCM2-201ENST00000258781 ERVW-1Q9UQF0 538 aa27.48■■□□□ 1.99
CCM2-201ENST00000258781 CCDC189A1A4V9 331 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 HEPACAM2A8MVW5 462 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 GRID2O43424 1007 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 PRAMEF1O95521 474 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 ITGALP20701 1170 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 RIPK1Q13546 671 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 SLC9B1Q4ZJI4 515 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 LYPLAL1Q5VWZ2 237 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 TANGO2Q6ICL3 276 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 FRMD7Q6ZUT3 714 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 PARP9Q8IXQ6 854 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 KDM1BQ8NB78 822 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 TTC1Q99614 292 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 DUS2Q9NX74 493 aaKnown RBP27.47■■□□□ 1.99
CCM2-201ENST00000258781 H3BMM5 538 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 BMP1P13497 986 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 SP100P23497 879 aaPredicted RBP27.47■■□□□ 1.99
CCM2-201ENST00000258781 UBAP2LQ14157 1087 aaKnown RBP27.47■■□□□ 1.99
CCM2-201ENST00000258781 DHCR24Q15392 516 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 OR4D1Q15615 310 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 EML3Q32P44 896 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 FAM151BQ6UXP7 276 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 KIRREL3Q8IZU9 778 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 FAM136AQ96C01 138 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 ATOH8Q96SQ7 321 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 STK38LQ9Y2H1 464 aa27.47■■□□□ 1.99
CCM2-201ENST00000258781 TRBV5-4A0A0C4DH59 114 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 NPIPB15A6NHN6 443 aaPredicted RBP27.46■■□□□ 1.99
CCM2-201ENST00000258781 GOLGA8CPA6NN73 597 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 PRR5-ARHGAP8B1AHC4 643 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 PRMT5O14744 637 aaPredicted RBP27.46■■□□□ 1.99
CCM2-201ENST00000258781 BNIP3LO60238 219 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 KERAO60938 352 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 ENO1P06733 434 aaKnown RBP27.46■■□□□ 1.99
CCM2-201ENST00000258781 BPIP17213 487 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 RPS3P23396 243 aaKnown RBP eCLIP27.46■■□□□ 1.99
CCM2-201ENST00000258781 SPAM1P38567 509 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 VASPP50552 380 aaPredicted RBP27.46■■□□□ 1.99
CCM2-201ENST00000258781 ARHGAP8P85298 464 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 TMEM215Q68D42 235 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 UGT3A1Q6NUS8 523 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 Q6ZVU0 165 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 STAG3L4Q8TBR4 150 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 PHF21BQ96EK2 531 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 FAR2Q96K12 515 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 IL26Q9NPH9 171 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 TCF7L2Q9NQB0 619 aa27.46■■□□□ 1.99
CCM2-201ENST00000258781 NIPSNAP2O75323 286 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 CYP17A1P05093 508 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 HERVK_113P63132 956 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 NFATC2Q13469 925 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 GPR33Q49SQ1 333 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 ZNF678Q5SXM1 525 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 CRTC1Q6UUV9 634 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 SMRP1Q8NCR6 262 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 ERVK-6Q9BXR3 956 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 GSTO2Q9H4Y5 243 aa27.45■■□□□ 1.99
CCM2-201ENST00000258781 GLYATL1P3A0A0U1RQE8 302 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 HOXC11O43248 304 aaPredicted RBP27.44■■□□□ 1.98
CCM2-201ENST00000258781 ZNF7P17097 686 aaPredicted RBP27.44■■□□□ 1.98
CCM2-201ENST00000258781 HNRNPH1P31943 449 aaKnown RBP27.44■■□□□ 1.98
CCM2-201ENST00000258781 RECQLP46063 649 aaPredicted RBP27.44■■□□□ 1.98
CCM2-201ENST00000258781 VITQ6UXI7 678 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 LONP2Q86WA8 852 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 SERPINA9Q86WD7 417 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 AFAP1L2Q8N4X5 818 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 NAT16Q8N8M0 369 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 OR2A12Q8NGT7 310 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 CD200R1Q8TD46 325 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 WFIKKN2Q8TEU8 576 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 RIPOR3Q96MK2 946 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 CCDC28BQ9BUN5 200 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 ASB8Q9H765 288 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 COL4A3Q01955 1670 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 ADH5P11766 374 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 GEN1Q17RS7 908 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 ACAD11Q709F0 780 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 RAB44Q7Z6P3 723 aaPredicted RBP27.44■■□□□ 1.98
CCM2-201ENST00000258781 TSPAN33Q86UF1 283 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 RBFAQ8N0V3 343 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 MRGPRX3Q96LB0 322 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 MIPEPQ99797 713 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 SHCBP1LQ9BZQ2 653 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 ZFP14Q9HCL3 533 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.44■■□□□ 1.98
CCM2-201ENST00000258781 GTSE1Q9NYZ3 720 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 GALPQ9UBC7 116 aa27.44■■□□□ 1.98
CCM2-201ENST00000258781 TRPC5OSA6NMA1 111 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 E5RI56 91 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 SPECC1L-ADORA2AF8WAN1 911 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 GYG2O15488 501 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 GPR39O43194 453 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 ADH1CP00326 375 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 UGT2B4P06133 528 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 HNRNPLP14866 589 aaKnown RBP eCLIP27.43■■□□□ 1.981e-7■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms