RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PRKCZQ05513 592 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 MINDY4Q4G0A6 757 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 VARS2Q5ST30 1063 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 RBM44Q6ZP01 1051 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 CHST15Q7LFX5 561 aaPredicted RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 ANKRD23Q86SG2 305 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 CPNE8Q86YQ8 564 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 CADM2Q8N3J6 435 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 RDH11Q8TC12 318 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 IPPKQ9H8X2 491 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 FBXW2Q9UKT8 454 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 PLLPQ9Y342 182 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 KHDRBS3O75525 346 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 TCEA3O75764 348 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 WARSP23381 471 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 TMEM192Q8IY95 271 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 ZNF607Q96SK3 696 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 AGAP2Q99490 1192 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 DPEP2Q9H4A9 486 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 LRTM1Q9HBL6 345 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 SH3GLB1Q9Y371 365 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 IPO13O94829 963 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 DRG2P55039 364 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 SPIRE1Q08AE8 756 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 LSM12Q3MHD2 195 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 PARP15Q460N3 678 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 CRY2Q49AN0 593 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 CPA6Q8N4T0 437 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 PIGKQ92643 395 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 GINS4Q9BRT9 223 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 AP4B1Q9Y6B7 739 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 PPLO60437 1756 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 MATN4O95460 622 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 TBX18O95935 607 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 GOT2P00505 430 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 VIPP01282 170 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 SIM2Q14190 667 aaPredicted RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC44A1Q8WWI5 657 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 GBA3Q9H227 469 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 TPK1Q9H3S4 243 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 COL1A2P08123 1366 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 RYKP34925 604 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 SPAM1P38567 509 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 PCDH1Q08174 1060 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 MREGQ8N565 214 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 CIB1Q99828 191 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 KLHL31Q9H511 634 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 BTBD3Q9Y2F9 522 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 HBS1LQ9Y450 684 aaKnown RBP18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 FPGTO14772 594 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 GSTT1P30711 240 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 ALG11Q2TAA5 492 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 ARMC3Q5W041 872 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 POC5Q8NA72 575 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 NEK7Q8TDX7 302 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 EEF1AKMT1Q8WVE0 214 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 CLEC4DQ8WXI8 215 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 PRRG4Q9BZD6 226 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 ARHGEF4Q9NR80 690 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 STXBP5LQ9Y2K9 1186 aa18.58■□□□□ 0.57
SMARCC1-201ENST00000254480 CHRNGP07510 517 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 PTPN9P43378 593 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 VSTM1Q6UX27 236 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 TAF8Q7Z7C8 310 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC34A3Q8N130 599 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF248Q8NDW4 579 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 DNASE1L2Q92874 299 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 HTATIP2Q9BUP3 242 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 MARCH7Q9H992 704 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 HMG20AQ9NP66 347 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 ALKBH4Q9NXW9 302 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC17A6Q9P2U8 582 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 SORCS3Q9UPU3 1222 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 CORO2BQ9UQ03 480 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 GNA12Q03113 381 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 B3GNT6Q6ZMB0 384 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 ZHX1-C8orf76Q96EF9 292 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC35C2Q9NQQ7 365 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 ADAMTS3O15072 1205 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 TMCC2O75069 709 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 LYPLA2O95372 231 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 METTL3Q86U44 580 aaKnown RBP18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 MYDGFQ969H8 173 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 CAPNS2Q96L46 248 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC39A8Q9C0K1 460 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 PHPT1Q9NRX4 125 aaPredicted RBP18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 KCTD5Q9NXV2 234 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 FKBPLQ9UIM3 349 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF222Q9UK12 451 aa18.58■□□□□ 0.56
SMARCC1-201ENST00000254480 GLTPD2A6NH11 291 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 METTL18O95568 372 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 RPIAP49247 311 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SULT2A1Q06520 285 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 NR1D2Q14995 579 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 ZBTB6Q15916 424 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 ANXA8L1Q5VT79 327 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 GPR135Q8IZ08 494 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 NRSN1Q8IZ57 195 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms