RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ART4Q93070 314 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 RIOK2Q9BVS4 552 aaKnown RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 GOLGA6AQ9NYA3 693 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 KCNK4Q9NYG8 393 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 AKAP7Q9P0M2 348 aaPredicted RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 DNPEPQ9ULA0 475 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 PCDHB11Q9Y5F2 797 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 BZW2Q9Y6E2 419 aaKnown RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 OAS3Q9Y6K5 1087 aaKnown RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 PRRC2CQ9Y520 2896 aaKnown RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 CYSRT1A8MQ03 144 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 FADS2P1A8MWK0 482 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 SUV39H1O43463 412 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 AVPP01185 164 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 SERPING1P05155 500 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 MMP2P08253 660 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 CCNCP24863 283 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 CSRP3P50461 194 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 KRT81Q14533 505 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 IFI16Q16666 785 aaKnown RBP10.22□□□□□ -0.77
VPS50-201ENST00000251739 ATP13A4Q4VNC1 1196 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 ANKRD20A8PQ5CZ79 823 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 WDR74Q6RFH5 385 aaPredicted RBP10.22□□□□□ -0.77
VPS50-201ENST00000251739 PRICKLE2Q7Z3G6 844 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 ZNF761Q86XN6 746 aaPredicted RBP10.22□□□□□ -0.77
VPS50-201ENST00000251739 GALNT13Q8IUC8 556 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 NDUFAF2Q8N183 169 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 ZSCAN1Q8NBB4 408 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 EXD1Q8NHP7 514 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 ASPSCR1Q9BZE9 553 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 SARS2Q9NP81 518 aaKnown RBP10.22□□□□□ -0.77
VPS50-201ENST00000251739 GEMIN8Q9NWZ8 242 aaKnown RBP10.22□□□□□ -0.77
VPS50-201ENST00000251739 OCIAD1Q9NX40 245 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 NFKBIL1Q9UBC1 381 aaPredicted RBP10.22□□□□□ -0.77
VPS50-201ENST00000251739 PILRAQ9UKJ1 303 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 CHKBQ9Y259 395 aa10.22□□□□□ -0.77
VPS50-201ENST00000251739 PRR19A6NJB7 356 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 MYO1FO00160 1098 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 INPP4BO15327 924 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 DUX1O43812 170 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 PROSCO94903 275 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 MAP3K6O95382 1288 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 CLDN7O95471 211 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 ATP1A1P05023 1023 aaKnown RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 SFTPCP11686 197 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 LIFP15018 202 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 MPSTP25325 297 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 CSTF2P33240 577 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS50-201ENST00000251739 SPINT3P49223 89 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 EPHA4P54764 986 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 RAB15P59190 212 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 TAS2R40P59535 323 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 ZBED6P86452 979 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 NFKB2Q00653 900 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 GBE1Q04446 702 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 SLC10A2Q12908 348 aaPredicted RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 TIGD7Q6NT04 549 aaPredicted RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 ALKBH5Q6P6C2 394 aaKnown RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 MARK2Q7KZI7 788 aaKnown RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 CNTD1Q8N815 330 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 ZNF564Q8TBZ8 553 aaPredicted RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 JPH3Q8WXH2 748 aaPredicted RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 COL26A1Q96A83 441 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 EID2BQ96D98 161 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 HDAC11Q96DB2 347 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 RTP4Q96DX8 246 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 TEFMQ96QE5 360 aaKnown RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 TRIB3Q96RU7 358 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 ADNPQ9H2P0 1102 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 RMI1Q9H9A7 625 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 PCDH9Q9HC56 1237 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 RBM22Q9NW64 420 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS50-201ENST00000251739 SIDT1Q9NXL6 827 aaKnown RBP10.21□□□□□ -0.77
VPS50-201ENST00000251739 SLC39A1Q9NY26 324 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 DTLQ9NZJ0 730 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 TBC1D29Q9UFV1 150 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 CAPN11Q9UMQ6 739 aa10.21□□□□□ -0.77
VPS50-201ENST00000251739 MN1Q10571 1320 aaPredicted RBP10.21□□□□□ -0.78
VPS50-201ENST00000251739 UTP20O75691 2785 aaKnown RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 C1orf232A0A0U1RR37 186 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 RGSL1A5PLK6 1076 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 LILRA5A6NI73 299 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 EFCAB7A8K855 629 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 PPFIA2O75334 1257 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 GYPCP04921 128 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 F3P13726 295 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 CA4P22748 312 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 HNRNPH3P31942 346 aaKnown RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 CLCNKAP51800 687 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 EPHB1P54762 984 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 UBE2IP63279 158 aaKnown RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 IFI35P80217 286 aaPredicted RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 FANCCQ00597 558 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 MC2RQ01718 297 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 HHEXQ03014 270 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 ZBTB17Q13105 803 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 BIRC2Q13490 618 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms