RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RAP1GAP2Q684P5 730 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 CYHR1Q6ZMK1 362 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 LARP4Q71RC2 724 aaKnown RBP eCLIP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 GPR180Q86V85 440 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 RETREG3Q86VR2 466 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 EPHX4Q8IUS5 362 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 SLC22A9Q8IVM8 553 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 FUNDC1Q8IVP5 155 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 PCYOX1LQ8NBM8 494 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 ZUFSPQ96AP4 578 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 TRIM15Q9C019 465 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 NACA2Q9H009 215 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 FBRSL1Q9HCM7 1045 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 MRPL17Q9NRX2 175 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 PTBP2Q9UKA9 531 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 DLGAP1O14490 977 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 PMPCBO75439 489 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF789Q5FWF6 425 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 KIAA0408Q6ZU52 694 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 C12orf43Q96C57 262 aaKnown RBP16.89■□□□□ 0.29
FOXA1-201ENST00000250448 IL12RB2Q99665 862 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ADI1Q9BV57 179 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 AURKCQ9UQB9 309 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 C5orf42Q9H799 3197 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ATP6AP2A0A1C7CYW4 349 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 BBIP1A8MTZ0 92 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF701M0R085 212 aaPredicted RBP16.89■□□□□ 0.29
FOXA1-201ENST00000250448 NME4O00746 187 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 UBFD1O14562 309 aaKnown RBP16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ATP6AP2O75787 350 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 CNTN5O94779 1100 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 HNRNPCP07910 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
FOXA1-201ENST00000250448 CNPP09543 421 aaKnown RBP16.89■□□□□ 0.29
FOXA1-201ENST00000250448 CLCN5P51795 746 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.29
FOXA1-201ENST00000250448 MS4A13Q5J8X5 152 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 CAMK1DQ8IU85 385 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 ARHGAP12Q8IWW6 846 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 FSD1LQ9BXM9 530 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 GKN1Q9NS71 199 aa16.89■□□□□ 0.29
FOXA1-201ENST00000250448 DHRS12A0PJE2 317 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 SH3PXD2BA1X283 911 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 C2orf78A6NCI8 922 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 AQP12BA6NM10 295 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 NR5A2O00482 541 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
FOXA1-201ENST00000250448 UGT1A6P19224 532 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 GPX3P22352 226 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
FOXA1-201ENST00000250448 CTBSQ01459 385 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 INPP5AQ14642 412 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ACBD5Q5T8D3 534 aaPredicted RBP16.88■□□□□ 0.29
FOXA1-201ENST00000250448 AQP12AQ8IXF9 295 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 GPATCH1Q9BRR8 931 aaKnown RBP16.88■□□□□ 0.29
FOXA1-201ENST00000250448 PRKD2Q9BZL6 878 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 TBCCD1Q9NVR7 557 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 DOCK6Q96HP0 2047 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 MYOGP15173 224 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ALFQ53S48 1182 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 MANEALQ5VSG8 457 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ADAMTS16Q8TE57 1224 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 C19orf60Q96EN9 201 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 TSPAN17Q96FV3 270 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 TRMOQ9BU70 441 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ATXN3LQ9H3M9 355 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 FAIMQ9NVQ4 179 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 ABCD2Q9UBJ2 740 aa16.88■□□□□ 0.29
FOXA1-201ENST00000250448 HLA-DQB2P05538 268 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 TSPAN8P19075 237 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 ATP6V0D1P61421 351 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 FOXD4Q12950 439 aaPredicted RBP16.87■□□□□ 0.29
FOXA1-201ENST00000250448 ACAP2Q15057 778 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 KIF19Q2TAC6 998 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 IGSF8Q969P0 613 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 LRCH3Q96II8 777 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 DCUN1D5Q9BTE7 237 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 TTLL2Q9BWV7 592 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 SLC39A8Q9C0K1 460 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 IL1RL2Q9HB29 575 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 SMPD4Q9NXE4 827 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF840PA6NDX5 716 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 TRIM64A6NGJ6 449 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 COCHO43405 550 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 IRF1P10914 325 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 IMPDH1P20839 514 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 MERTKQ12866 999 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 RAB33AQ14088 237 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 C16orf72Q14CZ0 275 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
FOXA1-201ENST00000250448 PRMT9Q6P2P2 845 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 Q6ZNX1 250 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 KDELC2Q7Z4H8 507 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 PATL1Q86TB9 770 aaKnown RBP16.87■□□□□ 0.29
FOXA1-201ENST00000250448 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 ANKRD49Q8WVL7 239 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 MRGPRX2Q96LB1 330 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms