RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 CCL22O00626 93 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 UGT1A9O60656 530 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 HAUS5O94927 633 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 AP2A2O94973 939 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 MPOP05164 745 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 HOXC4P09017 264 aaPredicted RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 GSTM1P09488 218 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 RALBP11234 206 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 COL6A2P12110 1019 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 CXCL12P48061 93 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 CSRP3P50461 194 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 CCR5P51681 352 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
LSM8-201ENST00000249299 GSTM4Q03013 218 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 SGCGQ13326 291 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 ZKSCAN8Q15776 578 aaPredicted RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 INSCQ1MX18 579 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 ATP13A5Q4VNC0 1218 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 MROH9Q5TGP6 573 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 FAM45BPQ6NSW5 357 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 PSAPL1Q6NUJ1 521 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 ADAMTSL4Q6UY14 1074 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 TAS2R42Q7RTR8 314 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 CYP4X1Q8N118 509 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 FAM45AQ8TCE6 357 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 HMGB4Q8WW32 186 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 KCNJ9Q92806 393 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 SMC6Q96SB8 1091 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 COPS8Q99627 209 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 WRAP53Q9BUR4 548 aaKnown RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 RIOK2Q9BVS4 552 aaKnown RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 ZCCHC2Q9C0B9 1178 aaKnown RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 EPHX3Q9H6B9 360 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 UGT1A7Q9HAW7 530 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 UGT1A10Q9HAW8 530 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 UGT1A8Q9HAW9 530 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
LSM8-201ENST00000249299 CTNNAL1Q9UBT7 734 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
LSM8-201ENST00000249299 VWA7Q9Y334 891 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 TBC1D3DA0A087WVF3 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3IA0A087WXS9 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3EA0A087X179 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3KA0A087X1G2 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 A0A0U1RQS6 177 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 KLHL33A6NCF5 533 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3FA6NER0 549 aaPredicted RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 IGLON5A6NGN9 336 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 GPR89AB7ZAQ6 455 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3LB9A6J9 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.363e-8■■■□□ 19.2
LSM8-201ENST00000249299 LATO43561 262 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 RFPL1O75677 317 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 PIAS1O75925 651 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 ALDOAP04075 364 aaKnown RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 GSTA1P08263 222 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3HP0C7X1 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 GPR89BP0CG08 455 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 PKMP14618 531 aaKnown RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 STMN1P16949 149 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TRIM23P36406 574 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 CCNFP41002 786 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 SLC12A2P55011 1212 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 MPP1Q00013 466 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 SEMA3AQ14563 771 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 LRRC14Q15048 493 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 DBN1Q16643 649 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 PROX2Q3B8N5 592 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TTMPQ5BVD1 217 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3GQ6DHY5 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D3CQ6IPX1 549 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 CNSTQ6PJW8 725 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 MACC1Q6ZN28 852 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 PHYKPLQ8IUZ5 450 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.363e-9■■■■□ 21.5
LSM8-201ENST00000249299 TBC1D3Q8IZP1 549 aaPredicted RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 DCLK2Q8N568 766 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 SCAMP4Q969E2 229 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 GLYATL1Q969I3 302 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 MRRFQ96E11 262 aaKnown RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 AARSD1Q9BTE6 412 aaKnown RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 SLC17A9Q9BYT1 436 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 CLPBQ9H078 707 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 P2RY12Q9H244 342 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
LSM8-201ENST00000249299 LATS2Q9NRM7 1088 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 OGFRQ9NZT2 677 aa12.83□□□□□ -0.36
LSM8-201ENST00000249299 GNPTGQ9UJJ9 305 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms