RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 REV1Q9UBZ9 1251 aa9.72□□□□□ -0.85
IRF1-201ENST00000245414 CD300AQ9UGN4 299 aa9.72□□□□□ -0.85
IRF1-201ENST00000245414 MTF2Q9Y483 593 aaPredicted RBP9.72□□□□□ -0.85
IRF1-201ENST00000245414 GPIP06744 558 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 KCNA5P22460 613 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 CDH5P33151 784 aaPredicted RBP9.71□□□□□ -0.85
IRF1-201ENST00000245414 MGAT3Q09327 533 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 INCA1Q0VD86 236 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 POU4F3Q15319 338 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ASPRV1Q53RT3 343 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ALFQ53S48 1182 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ATF7IP2Q5U623 682 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 BRAT1Q6PJG6 821 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ENOSF1Q7L5Y1 443 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 FBXO33Q7Z6M2 555 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 CHAC2Q8WUX2 184 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 PTERQ96BW5 349 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 CEP41Q9BYV8 373 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.71□□□□□ -0.85
IRF1-201ENST00000245414 DBNDD1Q9H9R9 158 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 SMURF2Q9HAU4 748 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ENOPH1Q9UHY7 261 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 STON1Q9Y6Q2 735 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.85
IRF1-201ENST00000245414 LINC01387J3KSC0 135 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ATP6AP2O75787 350 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ANGPTL1O95841 491 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 FMO3P31513 532 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 GHRHRQ02643 423 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ITPK1Q13572 414 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 EFR3AQ14156 821 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ELOAQ14241 798 aaKnown RBP9.71□□□□□ -0.85
IRF1-201ENST00000245414 GPATCH4Q5T3I0 446 aaKnown RBP9.71□□□□□ -0.85
IRF1-201ENST00000245414 IL31Q6EBC2 164 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 PAMR1Q6UXH9 720 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 PRSS42Q7Z5A4 293 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ZNF557Q8N988 423 aaPredicted RBP9.71□□□□□ -0.85
IRF1-201ENST00000245414 ANKRD52Q8NB46 1076 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 CNIH3Q8TBE1 160 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 TWNKQ96RR1 684 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 C12orf57Q99622 126 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 LXNQ9BS40 222 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 STRA6Q9BX79 667 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ANKHQ9HCJ1 492 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 IL20Q9NYY1 176 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 EIF3KQ9UBQ5 218 aaKnown RBP9.71□□□□□ -0.85
IRF1-201ENST00000245414 TNS2Q63HR2 1409 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 ANKRD12Q6UB98 2062 aa9.71□□□□□ -0.85
IRF1-201ENST00000245414 PRSS44E7EML9 344 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 NME4O00746 187 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 SLC16A4O15374 487 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 CAPN5O15484 640 aaPredicted RBP9.71□□□□□ -0.86
IRF1-201ENST00000245414 HS6ST1O60243 411 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 RPL17P18621 184 aaKnown RBP9.71□□□□□ -0.86
IRF1-201ENST00000245414 ALDH3A2P51648 485 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 PTPN5P54829 565 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 ERVFC1P60507 584 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 ERVK-8P63133 956 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 ENPEPQ07075 957 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 SPIRE1Q08AE8 756 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 PPP1R8Q12972 351 aaKnown RBP9.71□□□□□ -0.86
IRF1-201ENST00000245414 CLCA4Q14CN2 919 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 QRICH1Q2TAL8 776 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 PARP15Q460N3 678 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 CACHD1Q5VU97 1274 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 TMEM199Q8N511 208 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 ZNF540Q8NDQ6 660 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 DNAJB14Q8TBM8 379 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.71□□□□□ -0.86
IRF1-201ENST00000245414 MKLN1Q9UL63 735 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 DAGLAQ9Y4D2 1042 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 ORC6Q9Y5N6 252 aa9.71□□□□□ -0.86
IRF1-201ENST00000245414 MYH9P35579 1960 aaKnown RBP9.71□□□□□ -0.86
IRF1-201ENST00000245414 MN1Q10571 1320 aaPredicted RBP9.71□□□□□ -0.86
IRF1-201ENST00000245414 TRAV20A0A0B4J274 112 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 ERVV-1B6SEH8 477 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 PPEF1O14829 653 aaPredicted RBP9.7□□□□□ -0.86
IRF1-201ENST00000245414 MSH4O15457 936 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 RECQL5O94762 991 aaPredicted RBP9.7□□□□□ -0.86
IRF1-201ENST00000245414 HNRNPLP14866 589 aaKnown RBP eCLIP9.7□□□□□ -0.86
IRF1-201ENST00000245414 RPS3P23396 243 aaKnown RBP eCLIP9.7□□□□□ -0.86
IRF1-201ENST00000245414 RAB14P61106 215 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 UBE3AQ05086 875 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 ZNF252P-AS1Q0IIN9 211 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 SETMARQ53H47 684 aaPredicted RBP9.7□□□□□ -0.86
IRF1-201ENST00000245414 LIPMQ5VYY2 423 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 CREB3L2Q70SY1 520 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 STRA8Q7Z7C7 330 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 FNDC5Q8NAU1 212 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 STON2Q8WXE9 905 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 TUBGCP3Q96CW5 907 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 C1orf74Q96LT6 269 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 KCNS3Q9BQ31 491 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 BCL7BQ9BQE9 202 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 SMOC2Q9H3U7 446 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 RIMKLBQ9ULI2 386 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 MFHAS1Q9Y4C4 1052 aa9.7□□□□□ -0.86
IRF1-201ENST00000245414 PABPN1LA6NDY0 278 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms