RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KIR2DL1P43626 348 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 ARSDP51689 593 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 SEC13P55735 322 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 MPP1Q00013 466 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 CCDC15Q0P6D6 951 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 UGT3A1Q6NUS8 523 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 CDHR3Q6ZTQ4 885 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 CAMK1DQ8IU85 385 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 ARMC2Q8NEN0 867 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 MDGA1Q8NFP4 955 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 GRIN3AQ8TCU5 1115 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 FRS2Q8WU20 508 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 PDCD6IPQ8WUM4 868 aaKnown RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 ELMO2Q96JJ3 720 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 UBXN10Q96LJ8 280 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 OMDQ99983 421 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 MRPL46Q9H2W6 279 aaKnown RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 TAS2R13Q9NYV9 303 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 IL1RAPL1Q9NZN1 696 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 KLHL42Q9P2K6 505 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 TMCO1Q9UM00 188 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 SPO11Q9Y5K1 396 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 ACTL7AQ9Y615 435 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 SLC30A1Q9Y6M5 507 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PRR5-ARHGAP8B1AHC4 643 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 K7ERQ8 282 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PSMD11O00231 422 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 TRIM24O15164 1050 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 SNNO75324 88 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-201ENST00000238688 TULP3O75386 442 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 NDUFS3O75489 264 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 DCTN3O75935 186 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 HAUS5O94927 633 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 KAT7O95251 611 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PRNPP04156 253 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
SLIRP-201ENST00000238688 CPA3P15088 417 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 FDXRP22570 491 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.315e-12■■■■■ 28.9
SLIRP-201ENST00000238688 DCDC1P59894 354 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 ARHGAP8P85298 464 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 TMPRSS15P98073 1019 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 ACAP2Q15057 778 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 CSRP2Q16527 193 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PLK5Q496M5 336 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 CEP68Q76N32 757 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 DGLUCYQ7Z3D6 616 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 SLC22A9Q8IVM8 553 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PAF1Q8N7H5 531 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 GPATCH11Q8N954 259 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 OR2A12Q8NGT7 310 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PPP1R14CQ8TAE6 165 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 PPP4R1Q8TF05 950 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 KCNJ9Q92806 393 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 ULK4Q96C45 1275 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 MRGPRX3Q96LB0 322 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 AARSD1Q9BTE6 412 aaKnown RBP13.12□□□□□ -0.31
SLIRP-201ENST00000238688 DUSP15Q9H1R2 295 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-201ENST00000238688 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 ELOVL2Q9NXB9 296 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 KCTD5Q9NXV2 234 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 EMCNQ9ULC0 261 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 MMP17Q9ULZ9 603 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 USH1CQ9Y6N9 552 aa13.12□□□□□ -0.31
SLIRP-201ENST00000238688 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 TRBV5-4A0A0C4DH59 114 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 C1orf232A0A0U1RR37 186 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 EDDM13A0A1B0GTR0 161 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 AGAP14A8MT82 685 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 GOLGA8TH3BQL2 631 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 GDF9O60383 454 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 TRIM13O60858 407 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ADAM23O75077 832 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 GJB3O75712 270 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 EPN2O95208 641 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 WISP3O95389 354 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 APBB3O95704 486 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 MYL2P10916 166 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ZNF7P17097 686 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 SPAM1P38567 509 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 TAS2R39P59534 338 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 DNAJB13P59910 316 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ATP6V0D1P61421 351 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 MRPS21P82921 87 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms