RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 POU2F3Q9UKI9 436 aa11.46□□□□□ -0.57
CCND1-201ENST00000227507 BTRCQ9Y297 605 aa11.46□□□□□ -0.57
CCND1-201ENST00000227507 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.57
CCND1-201ENST00000227507 C16orf96A6NNT2 1141 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 CLPXO76031 633 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 CHEK2O96017 543 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 CSF2RAP15509 400 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 OR1E1P30953 314 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 OPRL1P41146 370 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 ARHGEF7Q14155 803 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 DEPDC1Q5TB30 811 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 RSBN1Q5VWQ0 802 aaPredicted RBP11.46□□□□□ -0.58
CCND1-201ENST00000227507 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 FRA10AC1Q70Z53 315 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 PLD3Q8IV08 490 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 MICU2Q8IYU8 434 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 QKIQ96PU8 341 aaKnown RBP eCLIP11.46□□□□□ -0.58
CCND1-201ENST00000227507 CERS4Q9HA82 394 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 TRPV5Q9NQA5 729 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 ITM2CQ9NQX7 267 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 SUCOQ9UBS9 1254 aaKnown RBP11.46□□□□□ -0.58
CCND1-201ENST00000227507 SLC25A13Q9UJS0 675 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 A0A0J9YYE9 177 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 A0A1W2PQ67 120 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 CBX4O00257 560 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 TSPAN3O60637 253 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 GABRR2P28476 465 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 PBX3P40426 434 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 MATKP42679 507 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 CLDN10P78369 228 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 FRG1Q14331 258 aaKnown RBP11.46□□□□□ -0.58
CCND1-201ENST00000227507 SQLEQ14534 574 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 C6orf10Q5SRN2 563 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 OR7A2PQ8NGA2 310 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 ARNTL2Q8WYA1 636 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 NCLNQ969V3 563 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 MUS81Q96NY9 551 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 XYLT2Q9H1B5 865 aa11.46□□□□□ -0.58
CCND1-201ENST00000227507 MYBPHLA2RUH7 354 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 MGEA5O60502 916 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ZNF623O75123 536 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 GFAPP14136 432 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 NFKB1P19838 968 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 MATN1P21941 496 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 PPP4R4Q6NUP7 873 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CUZD1Q86UP6 607 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 PSTKQ8IV42 348 aaKnown RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 VPS37AQ8NEZ2 397 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 GPR152Q8TDT2 470 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CENPNQ96H22 339 aaPredicted RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 TMEM175Q9BSA9 504 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 MTF2Q9Y483 593 aaPredicted RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 ADGRA2Q96PE1 1338 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 TAF4O00268 1085 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 SDHDO14521 159 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ENPP3O14638 875 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 TBC1D4O60343 1298 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ENO2P09104 434 aaPredicted RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 PABPC1P11940 636 aaKnown RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 GSSP48637 474 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 TAF10Q12962 218 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CNSTQ6PJW8 725 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 TICAM1Q8IUC6 712 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CLIP4Q8N3C7 705 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ZNF557Q8N988 423 aaPredicted RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 POC5Q8NA72 575 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CALML6Q8TD86 181 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 PCED1BQ96HM7 432 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 TCF25Q9BQ70 676 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ALG9Q9H6U8 611 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 SIAEQ9HAT2 523 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 H3BMM5 538 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CDH5P33151 784 aaPredicted RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 CAPGP40121 348 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 GEMP55040 296 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 SMAD3P84022 425 aaKnown RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 DAB2P98082 770 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 CTBSQ01459 385 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ZNF846Q147U1 533 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ARHGAP17Q68EM7 881 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 HMBOX1Q6NT76 420 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 RALGPS2Q86X27 583 aaPredicted RBP11.45□□□□□ -0.58
CCND1-201ENST00000227507 ZNF555Q8NEP9 628 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ACDQ96AP0 544 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 VPS33AQ96AX1 596 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 LRCH3Q96II8 777 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ANAPC2Q9UJX6 822 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 ERGIC3Q9Y282 383 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 SLC30A1Q9Y6M5 507 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 COL4A5P29400 1685 aa11.45□□□□□ -0.58
CCND1-201ENST00000227507 UBA6A0AVT1 1052 aaPredicted RBP11.44□□□□□ -0.58
CCND1-201ENST00000227507 HCRTO43612 131 aa11.44□□□□□ -0.58
CCND1-201ENST00000227507 SNAP91O60641 907 aa11.44□□□□□ -0.58
CCND1-201ENST00000227507 GPR32O75388 356 aa11.44□□□□□ -0.58
CCND1-201ENST00000227507 MSL3P1P0C860 447 aa11.44□□□□□ -0.58
CCND1-201ENST00000227507 MLNP12872 115 aa11.44□□□□□ -0.58
CCND1-201ENST00000227507 KCNJ8Q15842 424 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms