RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 DDI1Q8WTU0 396 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 L3HYPDHQ96EM0 354 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CCDC97Q96F63 343 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 LINGO1Q96FE5 620 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 C1orf74Q96LT6 269 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 HAUS8Q9BT25 410 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 SUN2Q9UH99 717 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CDC14AQ9UNH5 594 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 MAGED1Q9Y5V3 778 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 ZFP37Q9Y6Q3 630 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 MYO7AQ13402 2215 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 GJB5O95377 273 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 NDST3O95803 873 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 TYMPP19971 482 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 SLC6A4P31645 630 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 MTPNP58546 118 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CREB5Q02930 508 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 TRIP4Q15650 581 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 NEDD8Q15843 81 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 MFSD14CQ5VZR4 134 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CCDC117Q8IWD4 279 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 KCTD14Q9BQ13 255 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 ADI1Q9BV57 179 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 PNPLA3Q9NST1 481 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CEPT1Q9Y6K0 416 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 FFAR3O14843 346 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 GPR42O15529 346 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 BNIP3LO60238 219 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 SNAP91O60641 907 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CYBBP04839 570 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 EEF1B2P24534 225 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 MC4RP32245 332 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 ACADVLP49748 655 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 TRAP1Q12931 704 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 RNF19BQ6ZMZ0 732 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 MDGA1Q8NFP4 955 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 PRM3Q9NNZ6 103 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 TLR8Q9NR97 1041 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 GID8Q9NWU2 228 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 TRMT6Q9UJA5 497 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 MED16Q9Y2X0 877 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 H3BNH8 94 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 STX7O15400 261 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 PRAMEF11O60813 436 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 PFDN1O60925 122 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CNPP09543 421 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 NRG1Q02297 640 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 GNA12Q03113 381 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 TMEM259Q4ZIN3 620 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 BEND5Q7L4P6 421 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 CARM1Q86X55 608 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 ABCG8Q9H221 673 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 ALG2Q9H553 416 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 UBA2Q9UBT2 640 aaPredicted RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 RSL24D1Q9UHA3 163 aaKnown RBP8.23□□□□□ -1.09
CDC27-201ENST00000066544 ZNF225Q9UK10 706 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 Q9Y3F1 56 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 ZNF236Q9UL36 1845 aa8.23□□□□□ -1.09
CDC27-201ENST00000066544 MKI67P46013 3256 aaKnown RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 NFKBIAP25963 317 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 HTR7P34969 479 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 STT3AP46977 705 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 OXCT1P55809 520 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 RPL26P61254 145 aaKnown RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 SLC14A2Q15849 920 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 METTL6Q8TCB7 284 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 APOL5Q9BWW9 433 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 TM6SF2Q9BZW4 377 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 SYTL2Q9HCH5 934 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 EBF1Q9UH73 591 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 CCDC154A6NI56 674 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 B4GAT1O43505 415 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 CHEK2O96017 543 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 C1RP00736 705 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 NR6A1Q15406 480 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 SETMARQ53H47 684 aaPredicted RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 NHSL2Q5HYW2 709 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 TMEM126BQ8IUX1 230 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 PHYKPLQ8IUZ5 450 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 ADGRG5Q8IZF4 528 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 SCML4Q8N228 414 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 BBS5Q8N3I7 341 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 OR2T11Q8NH01 316 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 FUBP1Q96AE4 644 aaKnown RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 FEM1CQ96JP0 617 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 CCM2LQ9NUG4 571 aaPredicted RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 GALNT8Q9NY28 637 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 UNCXA6NJT0 531 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 MAGEB3O15480 346 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 TMCC1O94876 653 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 SNAP29O95721 258 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 CDK4P11802 303 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 HOXD9P28356 352 aaPredicted RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 SGSHP51688 502 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 IST1P53990 364 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 OR4D2P58180 307 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 TXNL4AP83876 142 aaKnown RBP8.22□□□□□ -1.09
CDC27-201ENST00000066544 PRKCZQ05513 592 aa8.22□□□□□ -1.09
CDC27-201ENST00000066544 IL27RAQ6UWB1 636 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms