RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Ltn1Q6A009 1767 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm42688A0A0R3P9D1 673 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Pgbd1E9Q492 415 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ccdc7bE9Q9Y3 381 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Klrb1bP27812 223 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Col6a2Q02788 1034 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ubtfl1Q3USZ2 394 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Sel1l2Q3V172 688 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cntn2Q61330 1040 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 TsnQ62348 228 aaKnown RBP13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Klhl17Q6TDP3 640 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cfap97Q6ZPR1 541 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Trnau1apQ80VC6 287 aaKnown RBP13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ccdc142Q8CAI1 738 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mtif2Q91YJ5 727 aaKnown RBP13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 HephQ9Z0Z4 1157 aa13.78□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nup98Q6PFD9 1816 aaKnown RBP13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm4924A0A1B0GR71 966 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Klhl32A2AJX0 620 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fam151bD3YUE4 279 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Sema6aO35464 1031 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm29609Q3UU56 907 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Spata48Q5NC83 441 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Stmnd1Q6P3A1 279 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Bend6Q6PFX2 281 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr855Q7TRF8 312 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gtf3c2Q8BL74 907 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Usp43Q8BUM9 1132 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Socs4Q91ZA6 436 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mgrn1Q9D074 532 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Q9D3J9 298 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Leng1Q9DB98 261 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Znf354bQ9QXT9 601 aa13.77□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 H2-T24F8VQG4 363 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm11236J3QMS7 360 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr694K7N641 315 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gpr25P0C5I1 358 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 ChgbP16014 677 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tnfaip8l3Q3TBL6 204 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gabra5Q8BHJ7 463 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mettl21eQ8CDZ2 244 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 N4bp2l2Q8JZS6 575 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Retreg1dQ8VE91 480 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Atp6v1g1Q9CR51 118 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mgat4dQ9D4R2 373 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mcemp1Q9D8U6 183 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm45233A0A0N4SVE0 221 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 BC024978J3QPC3 361 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vmn2r44L7N2E1 861 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Hs3st1O35310 311 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Xylt1Q811B1 953 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Zfp623Q9CY99 499 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Fer1l6E0CZ42 1862 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ccdc88cQ6VGS5 2009 aa13.77□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 MndalD0QMC3 538 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm340F6RGI3 1242 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Nsmce4aG3XA30 381 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 ChkaO54804 453 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 PnmtP40935 295 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cdh5P55284 784 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Hk3Q3TRM8 922 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slc7a4Q8BLQ7 635 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Hectd2Q8CDU6 774 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cfap61Q8CEL2 1252 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gstm4Q8R5I6 218 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pcdhb6Q91XZ4 772 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pwp1Q99LL5 501 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Chmp1b1Q99LU0 199 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Nkd1Q99MH6 471 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cacng4Q9JJV4 327 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Sult2a7A0A1B0GRF0 313 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slc4a5E9Q3M5 1116 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Akr1c6P70694 323 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Brsk1Q5RJI5 778 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Itga7Q61738 1179 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Serpina12Q7TMF5 413 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cpsf4Q8BQZ5 211 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 PrkxQ922R0 355 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 2610042L04RikQ9D073 150 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vsig1Q9D2J4 407 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Bloc1s6Q9R0C0 172 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm17175E9Q528 179 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Limk2O54785 638 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Alas2P08680 587 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tuba4aP68368 448 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dok6Q2MHE5 331 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Q32M26 199 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mthfd1lQ3V3R1 977 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 PkdccQ5RJI4 492 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Man1c1Q6NXK9 625 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Psd2Q6P1I6 770 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Lrrc75bQ7TPD7 306 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tbc1d17Q8BYH7 645 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Guf1Q8C3X4 651 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Fem1cQ8CEF1 617 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cmc1Q9CPZ8 106 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Il17rbQ9JIP3 499 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 VarsQ9Z1Q9 1263 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Atrnl1Q6A051 1378 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pias1O88907 651 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms