RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Atp11bQ6DFW5 1175 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Arhgap26Q6ZQ82 814 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Kirrel1Q80W68 789 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gabra5Q8BHJ7 463 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Armcx6Q8K3A6 301 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pcdhgc3Q91XX1 934 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ilf2Q9CXY6 390 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cdkn2aipnlQ9D211 116 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ddit4Q9D3F7 229 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cog8Q9JJA2 640 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tuba8Q9JJZ2 449 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm6370A0A0G2JGX9 315 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zfp758E9QAA1 583 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm6309L7N481 315 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sema3aO08665 772 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Hes2O54792 157 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dnmt3aO88508 908 aaKnown RBP18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Adcyap1r1P70205 496 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dennd1bQ3U1T9 766 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Mocs1Q5RKZ7 636 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr463Q5SW49 311 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr462Q5SW50 311 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Six4Q61321 775 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cpa4Q6P8K8 420 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zfp606Q7TSV0 794 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tmem121Q80XA0 318 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 4930503B20RikQ80ZP0 234 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 DrgxQ8BYH0 263 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rab36Q8CAM5 267 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Usp45Q8K387 813 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fastkd2Q922E6 689 aaKnown RBP18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cdc26Q99JP4 85 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rwdd4Q9CPR1 188 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ttc25Q9D4B2 624 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Armc1Q9D7A8 282 aa18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Bag6Q9Z1R2 1154 aaKnown RBP18.22■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm21083A0A0G2JFD5 256 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Syndig1A2ANU3 258 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zfp780bE9Q2S6 806 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Akain1G3UWD5 69 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 KlO35082 1014 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rhox6O70238 227 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ctbp1O88712 441 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Krt1P04104 637 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ptpn22P29352 802 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tmem207P86045 143 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zfp607aQ3TQG9 686 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rsrp1Q3UC65 298 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fam35aQ3UEN2 891 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ankrd34bQ3UUF8 508 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Map2k2Q63932 401 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 SvoplQ6PDF3 494 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Maml1Q6T264 1020 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cspg5Q71M36 566 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Mtrf1lQ8BJU9 373 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Snrnp27Q8K194 155 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Trpv3Q8K424 791 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn1r205Q8R276 316 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Igsf8Q8R366 611 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nrbf2Q8VCQ3 287 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Basp1Q91XV3 226 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 HnrnpabQ99020 285 aaKnown RBP18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Psip1Q99JF8 528 aaKnown RBP18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dok4Q99KE3 325 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 PacrglQ9D3X5 248 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fam83dQ9D7I8 585 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cdh17Q9R100 827 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm12248A0A1W2P8B8 313 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 SmoktcrA2KF29 484 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm5930D3Z257 264 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cyp2w1E9Q816 493 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cbx3P23198 183 aaKnown RBP18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ppp3ccP48455 513 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 PrkacbP68181 351 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Patl1Q3TC46 770 aaKnown RBP18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tex24Q5DP50 351 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rnf145Q5SWK7 663 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Lingo3Q6GQU6 589 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tmem252Q8C353 183 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 ClyblQ8R4N0 338 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rmnd5bQ91YQ7 393 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nipsnap3bQ9CQE1 247 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fam227aQ9D3V8 625 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rgs3Q9DC04 966 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cyp4f14Q9EP75 524 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nmnat1Q9EPA7 285 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Med20Q9R0X0 212 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 H2afb2S4R1M3 115 aa18.21■□□□□ 0.51
Trim47-202ENSMUST00000106441 Skint6A7XUZ6 1240 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 4930558K02RikE0CXC6 182 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Pot1bH7BX60 640 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Atxn1lP0C7T6 687 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 RxrgP28705 463 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Hmx2P43687 273 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Slc11a2P49282 568 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Flt3lgP49772 232 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Gucy2eP52785 1108 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Hoxd13P70217 339 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 AurkaP97477 395 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 SirpaP97797 513 aa18.2■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms