RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Rab15Q8K386 212 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pcdhb11Q91UZ8 797 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gid8Q9D7M1 228 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 2010109A12RikQ9D875 119 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Aldh1a3Q9JHW9 512 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Thap11Q9JJD0 305 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Msgn1Q9JK54 188 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Alpk2Q91ZB0 2144 aa11.52□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zfp236S4R299 1847 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm21964A0A1W2P7S4 437 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gpatch4Q3TFK5 415 aaKnown RBP11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Krt2Q3TTY5 707 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cyp2j13Q3UNV4 503 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tnfaip2Q61333 691 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc13a5Q67BT3 572 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cd300aQ6SJQ0 318 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fmo9Q8C116 539 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Creb5Q8K1L0 357 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Trpd52l3Q9CQ14 231 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lrrc17Q9CXD9 443 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cmtm6Q9CZ69 183 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 D7h11orf16Q9JJR6 402 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gria3Q9Z2W9 888 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Znf318Q99PP2 2237 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 L3mbtl1A2A5N8 826 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 9230113P08RikD3YWX3 137 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ccdc153P0C7Q1 202 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc2a4P14142 509 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cbx3P23198 183 aaKnown RBP11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cct8P42932 548 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Polr2iP60898 125 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 PhexP70669 749 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Yy2Q3TTC2 378 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Kctd21Q3URF8 260 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Jak3Q62137 1100 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ip6k1Q6PD10 433 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cfap206Q6PE87 622 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 MtbpQ8BJS8 894 aaKnown RBP11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Q8BP99 230 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dpp9Q8BVG4 862 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Itpk1Q8BYN3 419 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 4933409G03RikQ8C5U0 320 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tprg1Q8CB49 279 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slfn5Q8CBA2 884 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Sept8Q8CHH9 429 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Traf3ip2Q8N7N6 555 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 BfarQ8R079 450 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mmgt2Q8R3L0 123 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr1494Q8VGP8 315 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cdhr5Q8VHF2 831 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pcdhb17Q91VD8 799 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pcdha8Q91Y12 946 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zdhhc13Q9CWU2 622 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pinx1Q9CZX5 332 aaKnown RBP11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dhx34Q9DBV3 1145 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 SgshQ9EQ08 502 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 NfkbizQ9EST8 728 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cldn19Q9ET38 224 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 1700011I03RikE9PYL8 271 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lrrc23O35125 340 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 P01668 110 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gdf7P43029 461 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cdkn2bP55271 130 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 UcmaQ14BU0 138 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rbbp7Q60973 425 aaKnown RBP11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gngt2Q61017 69 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 CcnhQ61458 323 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Actr3bQ641P0 418 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tdpoz3Q717B4 365 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pex26Q8BGI5 305 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Asrgl1Q8C0M9 326 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ifi205aQ8CGE8 404 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ist1Q9CX00 362 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tomm70Q9CZW5 611 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Atad1Q9D5T0 361 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ddi1Q9DAF3 408 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Trhr2Q9ERT2 382 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ap1m2Q9WVP1 423 aa11.51□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm3604A0A087WPN2 559 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Vmn2r46L7N282 809 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 P01673 111 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 PuraP42669 321 aaKnown RBP11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc11a2P49282 568 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cd163Q2VLH6 1121 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 B020004J07RikQ3UTC0 476 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc6a3Q61327 619 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 TsnQ62348 228 aaKnown RBP11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ntan1Q64311 310 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr667Q7TRP4 326 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nup54Q8BTS4 510 aaKnown RBP11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 DrgxQ8BYH0 263 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fbxo48Q8CAT8 161 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 4932414N04RikQ8CEQ9 752 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 NpntQ91V88 561 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cacng3Q9JJV5 315 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mki67E9PVX6 3177 aaKnown RBP11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm13128L7MU96 475 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Npr1P18293 1057 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ndst2P52850 883 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Polr3bP59470 1133 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms