RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 XpaQ64267 272 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Taf1cQ6PDZ2 836 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dnajb13Q80Y75 316 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zbtb42Q811H0 420 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 TxlngQ8BHN1 524 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm3411Q8C7R2 150 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr398Q8VFY0 314 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Camk1Q91YS8 374 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Anxa13Q99JG3 317 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 MrrfQ9D6S7 262 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mrpl40Q9Z2Q5 206 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bpifb9bA2AJD1 591 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Armc4B2RY50 1037 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm17615E9Q9P2 165 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pias1O88907 651 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gabrg2P22723 474 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Impdh2P24547 514 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Npy2rP97295 381 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 ItgadQ3V0T4 1168 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 DbhQ64237 622 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tpgs2Q66JT5 296 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rnf220Q6PDX6 566 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pcp4l1Q6W8Q3 68 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Deup1Q7M6Y5 601 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bpifb9aQ80XI7 591 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 1700001J03RikQ80ZR8 219 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Arl5aQ80ZU0 179 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmtc4Q8BG19 741 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Q8BGK9 164 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tspan9Q8BJU2 239 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PstkQ8BP74 359 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Leng9Q8BTN6 485 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nipal4Q8BZF2 406 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rfx6Q8C7R7 927 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pnpla8Q8K1N1 776 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Guca1bQ8VBV8 201 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr866Q8VFI7 312 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lims2Q91XD2 341 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ecrg4Q99LS0 148 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 AasdhpptQ9CQF6 309 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Serbp1Q9CY58 407 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fip1l1Q9D824 581 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ppp1r12aQ9DBR7 1029 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PygmQ9WUB3 842 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Kat6aQ8BZ21 2003 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm9774A0A0A6YVU8 407 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm28729A0A1B0GSW2 409 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Akap5D3YVF0 745 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Arg2O08691 354 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PbsnO08976 174 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Il4i1O09046 630 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Guca1aP43081 202 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pms2P54279 859 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rpl10lP86048 214 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Npas2P97460 816 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Qsox2Q3TMX7 692 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Svs1Q6WIZ7 820 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rpl10Q6ZWV3 214 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zswim6Q80TB7 1207 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Trmt12Q8BG71 446 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 AW551984Q8BGF0 804 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 SgtaQ8BJU0 315 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mpp7Q8BVD5 576 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nox1Q8CIZ9 591 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hacd3Q8K2C9 362 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Klhl25Q8R2P1 589 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hbp1Q8R316 516 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr784Q8VFZ9 319 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pcdhb13Q91Y06 796 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ddx28Q9CWT6 540 aaKnown RBP6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Znf106O88466 1888 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ajap1A2ALI5 412 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm13271B1AYH9 182 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp780bE9Q2S6 806 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Znf683I7HJS4 458 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Vmn2r70K7N702 854 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bub1O08901 1058 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pole2O54956 527 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Phactr1Q2M3X8 580 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm853Q3UNZ2 425 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 ScinQ60604 715 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 E2f5Q61502 335 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Muc19Q6JHY2 733 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr667Q7TRP4 326 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmem108Q8BHE4 574 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Slc7a4Q8BLQ7 635 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mterf4Q8BVN4 346 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 RhdQ8CF94 418 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Plcl2Q8K394 1128 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Haus3Q8QZX2 570 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tdrd12Q9CWU0 1215 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sppl2aQ9JJF9 523 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tcea2Q9QVN7 299 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Psmd13Q9WVJ2 376 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Chek2Q9Z265 546 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mbd1Q9Z2E2 636 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Plin4O88492 1403 aa6.86□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Igkv5-39A0A0G2JDV4 115 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmem245B1AZA5 876 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Akr1b10G5E895 316 aa6.85□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms