RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PABPC3Q9H361 631 aaKnown RBP9.39□□□□□ -0.91
PHGDH-228ENST00000641847 CD248Q9HCU0 757 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 DKK3Q9UBP4 350 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF711Q9Y462 761 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 TCAF1Q9Y4C2 921 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 SPO11Q9Y5K1 396 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 MAD1L1Q9Y6D9 718 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 KNL1Q8NG31 2342 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 CEP192Q8TEP8 1941 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 HEATR9A2RTY3 570 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CCDC151A5D8V7 595 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 SDR42E2A6NKP2 422 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 PYCARD-AS1I3L0S3 204 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 DNTTP04053 509 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 TIMP2P16035 220 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 C5AR1P21730 350 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 NFKBIAP25963 317 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 ELK3P41970 407 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 MAGEA4P43358 317 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 NEK3P51956 506 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 PCBP4P57723 403 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 POLR2LP62875 67 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 BNC1Q01954 994 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CBLBQ13191 982 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 ILKQ13418 452 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 PTPRRQ15256 657 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 UGP2Q16851 508 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 TBC1D25Q3MII6 688 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CCDC38Q502W7 563 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 ARHGAP40Q5TG30 622 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 ERAP2Q6P179 960 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 PCSK4Q6UW60 755 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 TMPRSS6Q8IU80 811 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 IGDCC3Q8IVU1 814 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 AADATQ8N5Z0 425 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 FBXO36Q8NEA4 188 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 HCAR2Q8TDS4 363 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CAVIN3Q969G5 261 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 LRRC39Q96DD0 335 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CNDP2Q96KP4 475 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 C9orf72Q96LT7 481 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 MCCC1Q96RQ3 725 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 RANBP9Q96S59 729 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 EBNA1BP2Q99848 306 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 HDAC8Q9BY41 377 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 TXLNGYQ9BZA5 131 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 MKRN2Q9H000 416 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CDC42EP4Q9H3Q1 356 aaKnown RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 CD93Q9NPY3 652 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 ARGLU1Q9NWB6 273 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 NINJ2Q9NZG7 142 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.38□□□□□ -0.91
PHGDH-228ENST00000641847 HACD3Q9P035 362 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 SAMD15Q9P1V8 674 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 B4GALT6Q9UBX8 382 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 IL17BQ9UHF5 180 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 TEX264Q9Y6I9 313 aa9.38□□□□□ -0.91
PHGDH-228ENST00000641847 SCN8AQ9UQD0 1980 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 A0A1W2PP55 124 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 NPIPB15A6NHN6 443 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 AURKAO14965 403 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 YKT6O15498 198 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 SPINT1O43278 529 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 RNASEH2AO75792 299 aaKnown RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 CRTAMO95727 393 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 CYP2A6P11509 494 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ADRB3P13945 408 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 H2AFXP16104 143 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 PGAM1P18669 254 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 LHCGRP22888 699 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ADRA1DP25100 572 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 VIPR1P32241 457 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 DRD3P35462 400 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 MMP12P39900 470 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF140P52738 457 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 PMS2P54278 862 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 CNTN1Q12860 1018 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 MSLNQ13421 630 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 LY6DQ14210 128 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 TTC31Q49AM3 519 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 PCID2Q5JVF3 399 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 PIP5KL1Q5T9C9 394 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 AGBL4Q5VU57 503 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 FBXL19Q6PCT2 694 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 FBXO38Q6PIJ6 1188 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 LYSMD3Q7Z3D4 306 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 TTC7BQ86TV6 843 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 TSPAN33Q86UF1 283 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 FAM124AQ86V42 546 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 LSMEM2Q8N112 164 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 C1orf216Q8TAB5 229 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 BRSK1Q8TDC3 778 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms