RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ZCCHC10Q8TBK6 192 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 HTRA1Q92743 480 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 SNAPC3Q92966 411 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 ERGIC1Q969X5 290 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 KIF1BPQ96EK5 621 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 BBS4Q96RK4 519 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 FUZQ9BT04 418 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 C1QTNF4Q9BXJ3 329 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 GLIS2Q9BZE0 524 aaPredicted RBP3.24□□□□□ -1.89
ATM-230ENST00000640388 SMYD2Q9NRG4 433 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 C20orf141Q9NUB4 165 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 SLC25A10Q9UBX3 287 aaPredicted RBP3.24□□□□□ -1.89
ATM-230ENST00000640388 TBX20Q9UMR3 447 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 NFE2L3Q9Y4A8 694 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 LRRFIP2Q9Y608 721 aaKnown RBP3.24□□□□□ -1.89
ATM-230ENST00000640388 FRYQ5TBA9 3013 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 ITPR3Q14573 2671 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 PALLDQ8WX93 1383 aa3.24□□□□□ -1.89
ATM-230ENST00000640388 HELZ2Q9BYK8 2649 aaKnown RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 ABCA12Q86UK0 2595 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 VPS13AQ96RL7 3174 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 TEX13CA0A0J9YWL9 993 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 PLSCR5A0PG75 271 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 EME2A4GXA9 379 aaPredicted RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 PI4K2BG5E9Z4 385 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 TSPAN4O14817 238 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 BCAT2O15382 392 aaPredicted RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 HSPA12AO43301 675 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 KLK8O60259 260 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ZIC3O60481 467 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 NDUFB4O95168 129 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 HEXAP06865 529 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 TSPY4P0CV99 314 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 TSPY10P0CW01 314 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ETFAP13804 333 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 XBP1P17861 261 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ITGAXP20702 1163 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 PAFAH1B1P43034 410 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 COMPP49747 757 aaPredicted RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 EFNA5P52803 228 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 EEF1A2Q05639 463 aaKnown RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 GRIK3Q13003 919 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 PPP2R5BQ15173 497 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 KIF19Q2TAC6 998 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 TMEM95Q3KNT9 176 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 NAA35Q5VZE5 725 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 RHBDF2Q6PJF5 856 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.23□□□□□ -1.89
ATM-230ENST00000640388 DGLUCYQ7Z3D6 616 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ANKARQ7Z5J8 1434 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ZC3HC1Q86WB0 502 aaKnown RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 TDRPQ86YL5 185 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 DHX40Q8IX18 779 aaKnown RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 ZCCHC9Q8N567 271 aaKnown RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 SMRP1Q8NCR6 262 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 LILRB1Q8NHL6 650 aaPredicted RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 SPATA3Q8NHX4 192 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 MTBPQ96DY7 904 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 RNF125Q96EQ8 232 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 SCMH1Q96GD3 660 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 KLHL15Q96M94 604 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 MMTAG2Q9BU76 263 aaKnown RBP3.23□□□□□ -1.89
ATM-230ENST00000640388 VEZTQ9HBM0 779 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 SLC9A2Q9UBY0 812 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 HSPB7Q9UBY9 170 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 MALT1Q9UDY8 824 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 FAM96BQ9Y3D0 163 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 SNX9Q9Y5X1 595 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 NFS1Q9Y697 457 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ZZEF1O43149 2961 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 USP47Q96K76 1375 aa3.23□□□□□ -1.89
ATM-230ENST00000640388 ZSWIM8A7E2V4 1837 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 DENND3A2RUS2 1198 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 SRRM3A6NNA2 597 aaPredicted RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 SMTNL1A8MU46 457 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 PRR23D1E9PI22 279 aaPredicted RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 AFPP02771 609 aaKnown RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 PRR23D2P0DMB1 279 aaPredicted RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 COX7A2P14406 83 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 DAOP14920 347 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 TUBP50607 506 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 GAS1P54826 345 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 DLG1Q12959 904 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 COASYQ13057 564 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 NEDD9Q14511 834 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 HIST2H2ACQ16777 129 aaPredicted RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 SLC9B1Q4ZJI4 515 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 FAM69AQ5T7M9 428 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 SLC9C2Q5TAH2 1124 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 FAM69BQ5VUD6 431 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 SPSB3Q6PJ21 355 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 DLK2Q6UY11 383 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 B3GNT6Q6ZMB0 384 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 ESX1Q8N693 406 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 ZNF114Q8NC26 417 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 PPM1EQ8WY54 764 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 FBXL8Q96CD0 374 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 ADGRG7Q96K78 797 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms