RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 HOXA1P49639 335 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-216ENST00000640058 TBX2Q13207 712 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-216ENST00000640058 DCTN2Q13561 401 aaKnown RBP4.58□□□□□ -1.68
CCDC7-216ENST00000640058 CXorf66Q5JRM2 361 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-216ENST00000640058 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 ARHGAP11AQ6P4F7 1023 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 CACNA2D4Q7Z3S7 1137 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 NRROSQ86YC3 692 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 CNBD1Q8NA66 436 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 KLHDC9Q8NEP7 349 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 TAAR8Q969N4 342 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 RRNAD1Q96FB5 475 aaKnown RBP4.58□□□□□ -1.68
CCDC7-216ENST00000640058 ST6GAL2Q96JF0 529 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 F2RL3Q96RI0 385 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 PAIP1Q9H074 479 aaKnown RBP4.58□□□□□ -1.68
CCDC7-216ENST00000640058 USP44Q9H0E7 712 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 TAF1P21675 1872 aa4.58□□□□□ -1.68
CCDC7-216ENST00000640058 C1orf226A1L170 272 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 EIF3CLB5ME19 914 aaKnown RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 HS3ST1O14792 307 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 EIF3DO15371 548 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 FAM106CPP0CH98 169 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 ZNF182P17025 639 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 ARL1P40616 181 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 EIF3BP55884 814 aaKnown RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 ERVK11-1P61568 191 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 PLIN5Q00G26 463 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 C18orf63Q68DL7 685 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 CDC73Q6P1J9 531 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 CEACAM20Q6UY09 585 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 ADSSL1Q8N142 457 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 WDSUB1Q8N9V3 476 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 ZNF524Q96C55 264 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 RRP36Q96EU6 259 aaKnown RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 NR1H4Q96RI1 486 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 SMC6Q96SB8 1091 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 PIP5K1AQ99755 562 aa4.57□□□□□ -1.68
CCDC7-216ENST00000640058 PRKRIP1Q9H875 184 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 LRRFIP2Q9Y608 721 aaKnown RBP4.57□□□□□ -1.68
CCDC7-216ENST00000640058 IGLV5-45A0A087WSX0 123 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 M0QZ24 198 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 KCNK5O95279 499 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 IGHV4-39P01824 125 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 EPHA8P29322 1005 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 APOBEC1P41238 236 aaKnown RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 FASLGP48023 281 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 NR0B1P51843 470 aaKnown RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 RPL24P83731 157 aaKnown RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 RUNX1T1Q06455 604 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 GRIK2Q13002 908 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 MAD2L1Q13257 205 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 ZRSR2Q15696 482 aaKnown RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 DECR1Q16698 335 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 GSTA5Q7RTV2 222 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 CTCFLQ8NI51 663 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 TAS1R2Q8TE23 839 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 STAMBPL1Q96FJ0 436 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 HARBI1Q96MB7 349 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 TFB2MQ9H5Q4 396 aaKnown RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 MARCH4Q9P2E8 410 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-216ENST00000640058 POLG2Q9UHN1 485 aa4.56□□□□□ -1.68
CCDC7-216ENST00000640058 ZCWPW2A0A1B0GU75 182 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 CTAGE9A4FU28 777 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 ANKRD28O15084 1053 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 MLYCDO95822 493 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 CTAGE8P0CG41 777 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 ALDH4A1P30038 563 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 HOXC9P31274 260 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 ICAM3P32942 547 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 UBA7P41226 1012 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 MMP14P50281 582 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 RARSP54136 660 aaKnown RBP4.55□□□□□ -1.68
CCDC7-216ENST00000640058 F2RL1P55085 397 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 CDC16Q13042 620 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 FRG1Q14331 258 aaKnown RBP4.55□□□□□ -1.68
CCDC7-216ENST00000640058 CDONQ4KMG0 1287 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 CTAGE4Q8IX94 777 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 FAM76AQ8TAV0 307 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 THAP6Q8TBB0 222 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 ZUFSPQ96AP4 578 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 FSD1Q9BTV5 496 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 AGXT2Q9BYV1 514 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 LRMDAQ9H2I8 198 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 WASH6PQ9NQA3 447 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 ABI3Q9P2A4 366 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 OR14J1Q9UGF5 321 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 GJD2Q9UKL4 321 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 CRYL1Q9Y2S2 319 aa4.55□□□□□ -1.68
CCDC7-216ENST00000640058 FAM90A26D6RGX4 464 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 TMEM178BH3BS89 294 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 SYNGR3O43761 229 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 PAX1P15863 534 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 UBA1P22314 1058 aaKnown RBP4.54□□□□□ -1.68
CCDC7-216ENST00000640058 DCTP40126 519 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 OLIG2Q13516 323 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 ZNF876PQ49A33 203 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 ARHGAP17Q68EM7 881 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 SLC35E4Q6ICL7 350 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 ZNF704Q6ZNC4 412 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms